Pseudomonas resinovorans CA10 (NBRC 106553), PCA10_RS26325
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas resinovorans NBRC 106553 DNA, complete geonome. [Details] | |
| DNA Sequence Upstream of Gene |
CCAGTACGGCAAGTTGAACGTCGGCCTGACCCAGCTGGAACCGGCCGGCAACTATGCCCTGAAATTGACCTTCGATGACGGCCACGACAGCGGCCTGTTC ACCTGGGACTACCTGTACCAGCTCGCCACTCGCCAAGAGGAGCTGTGGAACGACTATCTGCAGGAGCTCGCGGCCGCCGGCCGCTCCCGCGACCCGGACG AAACCGTGGTCAGGCTCATGCTCTAAAGCGGTGCATGCCGCGCCCCATTGCGCACCCCGCCGCCCAAGGTTAGGGCGCATTTTCTAAACACCCTCGACAT ACTCCCGCTGCAGCGATCTGTCTGCGGTCGGCTTGCGCAAACTGACAAACTCGGGTAACCAAGATCTGGCAGGTTCCATGCATTTGGCATAGCCAGATAC AGAGCATTAGGCGAAGTTCGCTTCGCCATCCCGGTAACCCGAGCGTGTCAGCGCGCTGTTCCGCAGGCGCTGTTCGACTCAGGACAATGGAGCGTCGTAG
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| DNA Sequence for Gene |
>PCA10_RS26325
ATGAGCAACAAGAACAACGAAGACCTGCAGCGGCAAGCCTCGGATAACACCCTGAACCTCAATCCGGTTATCGGGATCCGTGGCAAGGACCTGCTGTCTT CAGCTCGTATGGTGCTGTTGCAAGCCATCAAGCAACCCTTCCACAGTGCAAAACACGTCGCTCATTTCGGCCTGGAACTGAAGAACGTGCTGCTCGGGCA ATCCGGCCTGCAACCGGAGTCCGACGACCGCCGCTTCCATGACCCGGCCTGGAGCCAGAACCCGCTGTACAAACGCTACATGCAGACCTACCTCGCCTGG CGCAAGGAACTGCACAGCTGGATCGAGCAGAGCAACCTCTCCGAGCAGGACAGCAGCCGCGGCCACTTCGTCATCAACCTGATGACCGAGGCCATGGCGC CCACCAACAGCATGGCCAACCCGGCTGCGGTGAAGCGCTTCTTCGAGACCGGCGGCAAGAGCCTGCTGGACGGCCTTTCCCACCTGGCCAAGGACCTGGT CAACAACGGCGGCATGCCGAGCCAGGTGAACATGGACGCCTTCGAGGTCGGCAAGAACCTGGCCACCACCGAAGGCGCGGTGGTGTACCGCAACGACGTA CTGGAGCTGATCCAGTACAAACCCATCACCGAGAGCGTGCACGAGCGCCCGCTGCTGGTGGTGCCGCCGCAGATCAACAAGTTCTACGTCTTCGACCTGT CACCGGAAAAGAGCCTGGCGCGCTTCTGCCTGCGCAATGGCCTGCAGACTTTCATCGTCAGCTGGCGCAACCCGACCAAGGCGCAGCGCGAGTGGGGCCT GTCCACCTACATCGAGGCCCTCAAGGAAACCATCGATGTCATCCTGAAGATCACCGGCGCGAAGGACCTCAACATCCTCGGCGCCTGCTCCGGCGGCATC ACCACCGTCGCCCTGCTCGGCCACTACCAGGCCACCGGCCAGAACAAGGTCAACGCCTTCACCCAGATGGTCAGCGTGCTCGACTTCAACCTCAACACCC AGGTCGCCCTGTTCGCCGACGAACAGACCCTGGAGGCCGCCAAGCGCCGGTCGTACCAGGCCGGCGTGCTGGAGGGCAAGGACATGGCCAAGGTGTTCGC CTGGATGCGGCCGAACGACCTGATCTGGAACTACTGGGTCAACAACTACCTGCTGGGCAACGAGCCGCCGGCCTTCGACATCCTCTACTGGAACAACGAC ACCACGCGCCTGCCCGCGGCGCTGCACGGTGAGCTTGTGGAGATGTTCAAGACCAACCCGCTGACCCGCCCCCACGCCCTGGAAGTCAGCGGCACCCCCA TCGACCTCAAGCAGGTCACCTGCGACTTCTACTGCGTGGCCGGCACCACCGACCACATCACCCCCTGGGAAGCCTGCTACCGCTCGGCGCGGCTGCTGGG CGGCAAGTGCGAGTTCGTGCTGTCCAACAGCGGCCATATCCAGAGCATCCTCAACCCGCCGGGCAACCCCAAGGCGCGCTTCTCCACCAGCAGCGACATG CCGGAGGATCCGAAGCTCTGGCAGGAAAACGCCACCAAGCACGCCGACTCCTGGTGGTTGCACTGGCAGCAGTGGATCGCCGATCGCTCCGGCAAGACCA AGAAAGCCAACTTCAACCTGGGCAACAAGGCCTTCCCGGCTGGCGAGGCCGCGCCCGGCACCTACGTGCACGAGCGATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CAGATTGCACCTTGCGCACCACTGCCCATGGCACCGGGATGTGCCCTGCTCGCCGCCAGCCCTCGTGGCTGGCGGCAGCCAGGCACGACCTGGCGGATTC GGGAGGGGCCACCGGCGGCCTCTCCCGGTTTTCTAATCAATAGGGCTCCGCGCATGTCGCAACCTTTCGTATTCCGCACCATCGAGCTCGACGGCCAGAC CATCCGGACCGCCGTCCGCCCGGGGCAATCGCACATGACTCCGCTGCTGATCTTCAACGGCATCGGCGCCAACCTCGAACTGGTGTTCCCCTTCGTCCAG GCGCTGGACCCGGACCTGGAGGTGATCGCCTTCGACGTCCCCGGCGTCGGCGGCTCGTCCACCCCCAGCCGGCCCTACCGGTTCTCCGGCCTGGCCAAGC TCGCCGCACGCATGCTGGACTACCTGGACTACGGACAGGTCAGCGCCATCGGCGTGTCCTGGGGCGGCGCCCTGGCCCAGCAGTTCGCCCACGACTACCC
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| Amino Acid Sequence |
>poly(3-hydroxyalkanoate) polymerase 1
MSNKNNEDLQRQASDNTLNLNPVIGIRGKDLLSSARMVLLQAIKQPFHSAKHVAHFGLELKNVLLGQSGLQPESDDRRFHDPAWSQNPLYKRYMQTYLAW RKELHSWIEQSNLSEQDSSRGHFVINLMTEAMAPTNSMANPAAVKRFFETGGKSLLDGLSHLAKDLVNNGGMPSQVNMDAFEVGKNLATTEGAVVYRNDV LELIQYKPITESVHERPLLVVPPQINKFYVFDLSPEKSLARFCLRNGLQTFIVSWRNPTKAQREWGLSTYIEALKETIDVILKITGAKDLNILGACSGGI TTVALLGHYQATGQNKVNAFTQMVSVLDFNLNTQVALFADEQTLEAAKRRSYQAGVLEGKDMAKVFAWMRPNDLIWNYWVNNYLLGNEPPAFDILYWNND TTRLPAALHGELVEMFKTNPLTRPHALEVSGTPIDLKQVTCDFYCVAGTTDHITPWEACYRSARLLGGKCEFVLSNSGHIQSILNPPGNPKARFSTSSDM PEDPKLWQENATKHADSWWLHWQQWIADRSGKTKKANFNLGNKAFPAGEAAPGTYVHER
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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