Pseudomonas resinovorans CA10 (NBRC 106553), PCA10_RS24330
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas resinovorans NBRC 106553 DNA, complete geonome. [Details] | |
| DNA Sequence Upstream of Gene |
GGCCTTCCATGCCCACCAATGCAAAACAACAGAACAGCCAGCTGGTTCGTGGCTTCGAGCCCTACCAAGAGACCAAGGGCGAGGAGTACATGAGCGACCG CATGCGCGCTCACTTCACCAACATCCTCAACAAGTGGAAACTGGAGTTGATGGAAGAGGTGGATCGTACCGTGCACCACATGCAGGACGAGGCCGCCAAC TTCCCCGACCCGGCCGACCGCGCCAGCCAGGAAGAAGAGTTCAGCCTGGAACTGCGTGCCCGCGACCGCGAACGCAAGCTGATCAAGAAGATCGACGAGA CCCTCCAGCTGATCGAAGACAACGATTACGGCTGGTGCGACTCCTGCGGCGTAGAGATCGGCATCCGCCGTCTGGAAGCCCGCCCCACCGCCACCCTCTG CATCGACTGCAAGACCCTGGCGGAGATCAAGGAAAAGCAACTCGGCTCCTGATGCCGAAACGGGGCGCCATTGGCGCCCCGTTGCTTTGCCCCGCCCGAC
|
|
| DNA Sequence for Gene |
>PCA10_RS24330
ATGAGTACCCCCACCTATATCGGGCGCTTCGCCCCAACGCCCAGCGGCTATCTGCACTTCGGCTCGCTGGTGGCCGCCCTCGCCTCCTACCTCGATGCCC GCGCCAACAGCGGACGCTGGCTGCTGCGCATGGAAGACCTCGACCCCCCACGGGAAGTCGAGGGCGCCCAGGCGGCGATCTTGCATACCCTGGAAAACTA CGGCTTCGAGTGGGACGGCGAGATGATCCGCCAGAGCGACCGCCACGAAGCCTATGCCCAGGTGATCGACCGCCTCTACGAGATGGGCCTGGCCTACGCC TGCACCTGTTCACGCAAGCAACTGGAAGGCAGCCAGGGCATCTACCCGGGGACCTGCCGCAACGCCCAGCATCCGCAGCACGACGCGGCCATCCGCATTC GCGTGCCGGAGCTGGAATACCACTTCGTCGACCGCGTGCAGGGCGAGTACCGCCAGCACCTGGGCCGCGAAGTGGGCGACTTCGTCATTCGCCGCCGCGA CGGCCTTTATGCCTATCAACTGGCCGTGGTCCTGGACGACGCCTGGCAAGGCATCAACCAGGTGGTGCGCGGCGCCGACCTGCTGGACTCGACCCCGCGC CAGCTCTACCTGCAGGAACTGCTGGGCCTCAGCCAGCCGCGTTACCTGCATGTCCCCCTGATCATCCAGCCCGATGGCCACAAGCTGGGCAAGTCCTACC GCTCTCCGCCGCTGCCGGCCGACAGCGCGGCGCCGCTGCTGACCCGGGCGCTGCGCACCCTGGGCCAGGAGCCGCCGGACGAACTGGCCAGGCTGCGACC CCGCGAGGTGCTGGACTGGGGTATCGCCCACTGGGATGCCGGGCGTATCCCGCGCAGCCGCACACTGGCCGAGGCGCAACTGCGCTAG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GTCCCATCAGGGCACTCGCGGCACTCCGGGGCATTCGCTACCATCGCCGCAGACACGACGAGAAATGTGGCATGTACATCTACCGACTGGTCCTGCTCCT GGTAGTGGGGATCTACCTGTTCTCCCCCGCCATCATGGATTGGTGGATCGACCCCGATGGCGCCTGGTATCGCCCCTACCTGCTGTGGCTGATCCTGATC GTGGTGACCTTCATTCTGCAGAGTCAACGCGATGCTGATGAGCTTTAGCCTCACCCAGCTGATCCTGATCAGCGCTGCCTACCTCCTGGCCCTCTTCGGC GTAGCCTGGCTCAGCGACCGGGGCTTCGTCCCGCGCTGGATCGTCCGCCATCCGCTGACCTACACGCTGTCGCTCGGTGTCTACGCCAGCGCCTGGGCCT TCTATGGCACCGTCGGCCTGGCCTACCAGTACGGCTACGGCTTCCTCGCCAGCTACCTCGGCGTTTCCGGGGCCTTCCTGTTGGCGCCGGTGCTGCTCTA
|
|
| Amino Acid Sequence |
>glutamyl-Q tRNA(Asp) ligase
MSTPTYIGRFAPTPSGYLHFGSLVAALASYLDARANSGRWLLRMEDLDPPREVEGAQAAILHTLENYGFEWDGEMIRQSDRHEAYAQVIDRLYEMGLAYA CTCSRKQLEGSQGIYPGTCRNAQHPQHDAAIRIRVPELEYHFVDRVQGEYRQHLGREVGDFVIRRRDGLYAYQLAVVLDDAWQGINQVVRGADLLDSTPR QLYLQELLGLSQPRYLHVPLIIQPDGHKLGKSYRSPPLPADSAAPLLTRALRTLGQEPPDELARLRPREVLDWGIAHWDAGRIPRSRTLAEAQLR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|