Pseudomonas resinovorans CA10 (NBRC 106553), PCA10_RS24255
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas resinovorans NBRC 106553 DNA, complete geonome. [Details] | |
| DNA Sequence Upstream of Gene |
TATGGGCGGGGGTGAGCTCGCCGCGGGCCTGCACGGCACTGAGCAGGTTTTCCTGGGGGAACTGGCGCATCTTCAGCACATATTCGATGGCCGGGCCTTC TCCGCCGATCTGCGGCGCCTCGTGGCTACCGCTGATCGGGAGCACTTCCAGATAAAGGTCGCGGGTGAGGCGCTGGTTGAGGCGCAGCTCTTCCTCGCAG AAGTGCCGGCGCTGGTCGAGGTCGGTGAAGTCGAGGAAGCCGAAGTTCACTGGCTTCTTCACCTTGTAGACGTAGCTGCCGGTCAGCAGTACCCAGGAGA TGTGCGTCTCGATCACCTGGAACCCCTCTACCGGGTGCGGATAGAGAGCGGGGTTCTGCAGGGCGGCTATCAGGGACTGGCTCACGGGCTTTCCTTGTTC TGTCGCAGTAAAAGGTCGGCATTATCGCCTCTGTGGGCCAGGCTGCAAACCGTCAGGGCGCGCCTGTTGGCTGTGGATAAAGTGCGTATAATGCGCCGCC
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| DNA Sequence for Gene |
>PCA10_RS24255
ATGACACGTCCCCGATCCCCCAAATCCCGCTCTAAACGCCGTCCCAGCAGCCTTCGCCCCTGGTTGGGCTGGGCCCTCAAGCTAGGCCTGGTCGGCCTGG TGGTGCTGGCCGGCTTCGCCATCTACCTCGATGCCGTGGTCCAGGAGAAGTTCTCCGGCAAGCGCTGGACGGTCCCGGCCAAGGTCTATGCCCGGCCATT GGAACTGTTCGCCGGCCTGAAGCTGTCCAAGGATGACTTCCTCAAGGAACTGGACGCCCTCGGCTACCGCCGCGAGAGCCTGTCCAACGGTCCGGGCGCC GCATCGGTTTCCGGCAACAACGTCGAACTCAACACCCGCGGCTTCCAGTTCTATGAAGGCGCGGAGCCCGCCCAGCGCGTGCGCGTGCGTTTCTCCGGCG ATTACGTCGCCGGTCTGACCCAGGCCAACGGCGCCAACCTGGCGGTGGCTCGCCTCGAGCCGTTGCTGATCGGCGGCCTGTATCCCGCGCATCATGAAGA CCGCGTGCTGATCAAGCTCGACCAGGTGCCGGCCTATATGGTGGAAACCCTGGTGGCCACGGAGGACCGCGAGTTCTTCAATCACCACGGCGTGTCCCTC AAGTCCATCGCCCGGGCGTTCTGGGTCAACGCGACCGCCGGTGAACTGCGCCAGGGCGGCAGTACCCTAACCCAGCAGTTGGTGAAGAACTTCTACCTGA CCAGCGAGCGCAGCATTTCCCGCAAGGCCACCGAAGCCATGATGGCGGTGCTGCTGGAGCTGCACTACGACAAGCGCGAGATCCTCGAGGCTTACCTCAA CGAGGTGTTCCTCGGCCAGGACGGCCAGCGCGCCATCCACGGCTTCGGCCTGGCCAGCCAGTATTTCTTCAGCCAGCCCCTGGCGGAGCTGAAGCTGCAC CAGATCGCCTTGCTGGTGGGCATGGTCAAGGGACCGTCCTACTACAACCCGCGTCGTTATCCGGAGCGCGCGCTGGAGCGCCGCAACCTGGTGATCGACC TGCTGGCCGAGCAAGGCGTGGTGACGCCCGCGGAAGCCACCGCGGCGAAGCAGCGCCCGCTGGGCGTGACCCAGCGCGGCAGCCTGGCCGACAGCTCCTA TCCGGCGTTCCTCGACCTGGTGAAGCGCCAGCTGCGTGAGGACTACCGCGAGGAAGACCTGACCGAAGAAGGCCTGCGCATCTTCACCAGCTTCGACCCC ATCCTGCAGTCCAAGGCGGAAACTGCCCTGAACGAAACCCTCAAGCGCCTGGACGGGCGCAAGGGCGTCGACCAGGTGGAAGCGGCCATGGTCGTCAGCA ACCCCGAAACCGGCGAGATCCAGGCGCTGATCGGCAGCCGCCAGCCACGCTTCGCCGGCTTCAACCGCGCGGTGGACGCCGTGCGCCCCATCGGCTCGCT GATCAAGCCGGCGATCTACCTGACCGCGCTGGAGCGCCCGAGCCAGTTCACACTGACCAGTTGGGTGGTCGACGAGCCCTTCTCGGTGAAGGGGCAGGAC GGCCAGGTATGGCGCCCGCAGAACTATGATCGCCGCGCCCATGGCACCATCCCCCTGTACCAGGGGCTGGCCAACTCCTACAACTTGTCGACTGCCAAGC TGGGGCTGGAACTGGGCGTTCCCAATGTGCTCAAAACACTTGAACGGCTGGGTGTTTCCCGTGAGTGGCCGGCCTATCCCTCGATGCTCCTGGGCGCTGG CGCGCTGAGCCCGATGGAAGTGGCGACCATGTACCAGACCCTGGCCAATGGTGGTTTCAACACGCCGTTGCGGGGTATCCGCAGCGTACTGAACGCCGAG GGTGAGCCGCTCAAGCGCTATCCCTTCCAGATTCAGCAGCGTTTCGATCCGGGTTCCATCTACTTGGTGCAGAACGCCATGCAGCGGGTGATGCGCGAAG GTACCGCGCGTTCGGTGTACAGCCAGTTGCCATCGTCCCTGACCCTGGCGGGCAAGACCGGTACCACCAACGATTCGCGCGATAGCTGGTTCGCCGGCTT CAGCCAGGATCTGCTGGCGGTGGTATGGCTGGGGCGCGACGACAACGGCAAGACGCCGCTGACCGGAGCCACCGGCGCGCTGCAGGTCTGGACGAGCTTC ATGCGCAAGGCCGAGCCACTGCCGCTGGACATGCCGATGCCGGACAACGTGATACAAGCCTGGATTGACCCGCACAGTGGCCAGGGATCTGACCCGAGCT GCTCCGGAGCGGTCCAGATGCCCTACATTCGTGGCAGCGAACCCGCCCCCGGCTCGCCTTGCGGCCTGGGCGCACCCGTGGACTCGGTAATGGACTGGGT TCGCGGTTGGACGCAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACCGAGAGGAACAAACGTGAGTAAAGCCTGGATTCCCGCCCTTGCTGCAGCCGCCCTCCTGGCCGGCTGCTCCACCCCGCAGCGTGGCGCCATTCCCGTG GTCGATTCCGGCGCGCCCCTGTCCGAACTGGAACAGGGTAACTCCGGCGGTGGCTACAATCGGGCGCCCGCCGCGCCGCGCAGTGTGCCCGCCGACTCCG GTGTGGTGGTCATGGTGCCCGGCGCCAGTTCCGGTGCGCCGATTGCCGCGCCGGCTTCCAGCGCGCCCATCAGCGGCAGCATCACCAGTGGCGGTATCAC GCCCGGCCCCATTACCAGCGGCCCGGCGACCAGCGCACCCACGGCTCCTGCCTATGGTGCGCCCAGCTACGGCTCGCCGAGCTATAGCGCGCCGGCCCCC GTCGCCCCGAGCGGCATTCCCAGCACCAGTGGCGGCCTGGCTGCCGACGAGCAGCTCGATGGTCCGGTGCTGGCGCTGCTGACCACCGCCCAGCAACAGC
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| Amino Acid Sequence |
>penicillin-binding protein
MTRPRSPKSRSKRRPSSLRPWLGWALKLGLVGLVVLAGFAIYLDAVVQEKFSGKRWTVPAKVYARPLELFAGLKLSKDDFLKELDALGYRRESLSNGPGA ASVSGNNVELNTRGFQFYEGAEPAQRVRVRFSGDYVAGLTQANGANLAVARLEPLLIGGLYPAHHEDRVLIKLDQVPAYMVETLVATEDREFFNHHGVSL KSIARAFWVNATAGELRQGGSTLTQQLVKNFYLTSERSISRKATEAMMAVLLELHYDKREILEAYLNEVFLGQDGQRAIHGFGLASQYFFSQPLAELKLH QIALLVGMVKGPSYYNPRRYPERALERRNLVIDLLAEQGVVTPAEATAAKQRPLGVTQRGSLADSSYPAFLDLVKRQLREDYREEDLTEEGLRIFTSFDP ILQSKAETALNETLKRLDGRKGVDQVEAAMVVSNPETGEIQALIGSRQPRFAGFNRAVDAVRPIGSLIKPAIYLTALERPSQFTLTSWVVDEPFSVKGQD GQVWRPQNYDRRAHGTIPLYQGLANSYNLSTAKLGLELGVPNVLKTLERLGVSREWPAYPSMLLGAGALSPMEVATMYQTLANGGFNTPLRGIRSVLNAE GEPLKRYPFQIQQRFDPGSIYLVQNAMQRVMREGTARSVYSQLPSSLTLAGKTGTTNDSRDSWFAGFSQDLLAVVWLGRDDNGKTPLTGATGALQVWTSF MRKAEPLPLDMPMPDNVIQAWIDPHSGQGSDPSCSGAVQMPYIRGSEPAPGSPCGLGAPVDSVMDWVRGWTQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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