Pseudomonas resinovorans CA10 (NBRC 106553), PCA10_RS22710
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas resinovorans NBRC 106553 DNA, complete geonome. [Details] | |
| DNA Sequence Upstream of Gene |
ACCGGCGAGGACCTGATCCAGCGCGACGACGACAAGGAAGAGACCGTGCGTCATCGCCTGTCCGTCTACCACTCGCAGACCAAGCCGCTGGTGGACTTCT ACCAGAAGCTCTCCGCCGCCGAAGGCACCCCGAAGTACAGCGCCATCGCTGGCGTGGGCTCGGTGGAGGAGATCACCGGCAAGGTGCTGGCCGCTCTCAG CTGAGTGATCGCCTGTACCTGACCAACGGCCCGCTTGCGGGCCGTTGGTGTTTCTGGAGGGCGAGGGTCCCTGTTGGGTTTGGCTGCGCGAATAGCCGTA GGTTGGGCAGAGCTGCGCGAAGCCCAACGTAGCGATGGTGATCCGGAATCGTTGGGCTTCGCTTCGCTCTGCACCAACCTACGATTCAGTCCTATCTCTC CTCTTCAGGGAGAGGGTTGTTCAGGTATGAGCCAACACCCCGGCAATCCCCGCAGAACCGTTTATAATGCCCGCCTTTTTTCCACCGCCTGGACCTCTCG
|
|
| DNA Sequence for Gene |
>PCA10_RS22710
ATGACCACTCTGCTGGCCCTGGATACCGCCACCGAAGCCTGCTCCGTCGCCCTGCTGCATGACGGCAAGGTGCTCAGTCACTACGAGGTGATCCCGCGCC TGCACGCCCAGCGTCTGCTGCCGATGATCCAGACCCTGCTGGGCGACGCCGGTGTGCCCCTGGCGGCGGTGGATGCCATTGCCTTCGGCCGAGGCCCCGG CGCCTTCACCGGCGTGCGCATCGCCATCGGTGTCGTGCAGGGCCTGGCCTTCGCCCTGGATCGTCCGGTGCTGCCGGTGTCCGACCTGGCCGTGCTGGCC CAGCGCGCCCACCGCGAGCAGGGCGCCCAGCAGGTGGCATCGGCCATCGACGCACGCATGGACGAGGTCTACTGGGGCTGCTACCGCCTGGAGGCCGGCG AAATGCGCCTGGCCGGCGTGGAAGCGGTGCTGCCGCCGGAGCAGGCCCAGCTGCCCCGAGACGCCAGTGGCGACTGGTACGGCGCCGGTACCGGCTGGGG CACCTTCGCCGCGCGGATTCCGGTGCAGGTCAGCGGTCAATCGCCGGCCCTGCTGCCCCACGCCGAAGACCTGCTGACCCTGGCCCGCTTCGCCTGGGCC CGCGGCGAGGGCCTGGCCGCCGATCAGGCGCAACCGGTCTACCTGCGCGACAACGTCGCCACACCCAAGGCGCCGCAGTAG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
AATCGTCCTGATCCCTAGGCCCCGGATTGCCAAGCCGGGGCCGGACGGCTAGAGTCCGGCGGCAATCATCTCGAAATGCCAGCACTGCCGAGCAGTAACC GATGCGCATCGACGGCTTCACCTCTTCCTATCCGCTGGAACGCAGCCCCCGTCAGGGCAGCGCGGTCACGCCTTTCCGCGAGATCCAGCGCGAGGCCGAG GCGCGCCGCGAGCAGCCGGGTACGCCGTCGTCCACCCAGGGTTTCGAGCAGGCCCCTCAGCCCCGTCGGGTGCAGGCCGGCAATGCCTCCGGCGACAGCC TGCCGGTGCGTCCGCAGGACCTGATCCAGCAGCAACGCAGCATCAGCAATCGCGCGGCCCAGGCCATCGCCAGCTACAGCACCACCGCCCAGTTCGTTGC CGACTACGACGCCCCCGAAGTCCTCGGCCTCGACCTCTACGCCTGATGCTTCCCTATCACCTCGGCTGCCCGTCCTGGAACGAGCCGGCCTGGCGCGGCA
|
|
| Amino Acid Sequence |
>tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
MTTLLALDTATEACSVALLHDGKVLSHYEVIPRLHAQRLLPMIQTLLGDAGVPLAAVDAIAFGRGPGAFTGVRIAIGVVQGLAFALDRPVLPVSDLAVLA QRAHREQGAQQVASAIDARMDEVYWGCYRLEAGEMRLAGVEAVLPPEQAQLPRDASGDWYGAGTGWGTFAARIPVQVSGQSPALLPHAEDLLTLARFAWA RGEGLAADQAQPVYLRDNVATPKAPQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|