Pseudomonas resinovorans CA10 (NBRC 106553), PCA10_RS18265

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF002741
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0043190 ATP-binding cassette (ABC) transporter complex
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF002741
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pre02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.190.10 - - - 25 600 0.0
CDD cd08497 PBP2_NikA_DppA_OppA_like_14 - - 37 586 0.0
FunFam G3DSA:3.10.105.10:FF:000005 ABC transporter substrate-binding protein - - 322 580 2.4E-106
PIRSF PIRSF002741 MppA IPR030678 Peptide/nickel binding protein, MppA-type 26 605 1.4E-103
PANTHER PTHR30290 PERIPLASMIC BINDING COMPONENT OF ABC TRANSPORTER IPR039424 Solute-binding protein family 5 2 602 2.3E-80
Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IPR000914 Solute-binding protein family 5 domain 112 516 2.9E-72
SUPERFAMILY SSF53850 Periplasmic binding protein-like II - - 47 603 1.63E-121
Gene3D G3DSA:3.10.105.10 - - - 322 580 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.