Pseudomonas resinovorans CA10 (NBRC 106553), PCA10_RS16460

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas resinovorans NBRC 106553 DNA, complete geonome. [Details]
DNA Sequence Upstream of Gene
TGCCACGCGACCCGGAAGGCAGCCAGTACCTGGGCCAGGACCTGATCAGCCAGGTCTTCCATCGCTACCCGCAGATCGCCCACCTGGTGCCGCGCGACCT GCTCTGGTTCTTCGGCGGCGACTGCCTGCACTTCATGCCGGACGAAGAAATCGACATGTTCCAGCGCCTCGACGAACGCCGCTACGAAGCCGAGGAAAAC GGCAAGCCCTTCGACTGGAACCAGGAAAAACAGCTGCTGGCCCTGCCCACGGAAGGCAACAAGCACTGATTCCCCGAGGGGCGGCGTCCATGCCGCCCCT GCTCCGCTCCCCCTTGCTTCCCAGCAACGCCGCCTGCCATCCAACCCGTCTGCACCGCAGCTCTCAGCGTTATCCTCGCTCTTCCTCCCCACGACCGCCG ATCGGCCTTGTTGCGCGGGCAGATTGCGGGCCACCATGGCCCTCTGTCATCATTGCGAATCATTCTTAATCACTCTCACTTTTCTCCCATTGAGGTCAGC
DNA Sequence for Gene
>PCA10_RS16460
GTGTCGGCCGGTGATTCCGCGAACCCGCATCTGGTAGGGCTGCTCTATCGAGACCATCGTGACTGGCTGTTCGGCTGGCTACGCAAGACGGTGCACTGCC CCCACCGCGCGGAAGACGTCAGCCAGGACACCTTCCTGCGCCTGCTCGCCCGCGACGACCTGCAACCTCCCCGCGAGCCCCGCGCCCTGTTGGCCACCAT CGCCCGTGGCCTGCTGGTGGATCAGTTCCGCCGCAACGACCTGGAGCGCGCCTACCTGGACGAACTGGCGCAGGCACCCCACGACCTCCACCCCAACCCC GAGGAACAGGCCCTGATCCTGGAAAGCCTGCGGGAAATCGACCGCCTGCTGGGGCAACTGTCCAGCAAGGCGCGCAGCGCGTTTCTCTACAACCGCCTGG ACGGCCTCGGCCACGCCGAGATCGCCGAGCGCCTGGGGGTTTCCACCTCGCGGGTGCGCCAGTACCTGGCCCAGGGCATGCGCCAGTGCTACATCGCCCT CTACGGGGAGCCGACATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCGGGTTTCCGCACGGGCACTGGACGAGGCCATCGCCTGGCAGCTGTGCCTGGACTCCGGTGAGGCCTCCGAACTGGAGCGCCATGAGTTCCAGCGCTG GCTGGGCGCCCACCCCGAACACACCCAGGTCTGGCAACAGCTGGCCGGTATCGACCGCCAGCTGGCGGCGGCCACCCAGGCGCCGGCCCGTCGCGCCCTG CTGCGCAGCGGCGGCGTCAGGCGGCGCAGCCTGCACCGCGTCGGCGGTAGCGCCCTGAGCCTGCTGCTGGCGGTGGGGCTGGGCCTTGGCCTGCTGGCGC AACAACGGCCGCTGGGGGATTACCTGGCGGACGAGATGACCGCCAGCGGCGAACACCGCGAACTGCGCCTGGCGGACCACAGTCTGGTCCAACTCAACAG CCGCACCGCCCTGGATATCGACTTCGACGGAGCGCAGCGCCGGCTCTACCTGCGCAGCGGCGAAATCCTGGTGAAGACCGGCCACGACGACCCGCGCCCC
Amino Acid Sequence
>RNA polymerase ECF-type sigma factor
MSAGDSANPHLVGLLYRDHRDWLFGWLRKTVHCPHRAEDVSQDTFLRLLARDDLQPPREPRALLATIARGLLVDQFRRNDLERAYLDELAQAPHDLHPNP EEQALILESLREIDRLLGQLSSKARSAFLYNRLDGLGHAEIAERLGVSTSRVRQYLAQGMRQCYIALYGEPT
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site