Pseudomonas resinovorans CA10 (NBRC 106553), PCA10_RS15120 (ampC)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas resinovorans NBRC 106553 DNA, complete geonome. [Details] | |
| DNA Sequence Upstream of Gene |
CGCCACCCAGTGGCTGAACAGCCCGCCGCTGAGCACCCAGAATCTGCTGGGCAAGGTGGTACTGGTGGACTTCTGGACCTACGACTGCATCAACTGCCAG CACAGCCTGCCCTATGTGAACGAGTGGGCCCGGCGTTACGCCGACCAGGGTCTGGTGGTGATCGGCGTGCACACCCCCGAGTACCCCTACGAGCGGATTC TCGACAACGTGCGCGCGGCCATGGGGAAACTCGATATCCGCTACCCGGTGGCCATCGACAACCAGTACCGGATCTGGAACGCCTTCATCAACCAGTACTG GCCGGCGCACTACTTCATCGACGCCCATGGACGCATCCGACACCTGGCGGTGGGCGAGGGCGGTTACGAGGAGCAGGAAGCGGTGATCAAGCAACTGCTC AAGGAGCGCGCCGAGGAGGCCGCCGCAGGCTGAAAACCTTGGGTTGGGCGGGCAGGGGTGCTAGCTTCTCCGGCCCGTTCGATTTTCGAGGACCATCAGC
|
|
| DNA Sequence for Gene |
>PCA10_RS15120
|ampC
ATGCGCCTGACCGCCAAATTCCTGCTGCTCGCCCTGGCCTGCGGCCACGGCGGCGTCACCCTGGCCGACGACCAGGATGCCGCCGTGCAGCGCGCCGCGC GGGACCTGATGCAGGAATACCGCATCCCGGGCCTGGCCATCGCGATCACCGCCCATGGCGAGCAACGCTTCTACAACTTCGGTGTGGCCTCGAAGGAAAG TGGGCAGCAGGTTACCCAGGACACCCTGTTCGAGGTGGGCTCGGTCAGCAAGACGCTGACCGCGACCCTCGCCGGCTACGCACAGGCCAATGGCCGGCTC GACCTTGGCGCCAACCCCGTCCGGTACCTGCCGGAACTGGCGGGCACCGCGCTGGACAAGGTCTCCCTGATCAACCTGGCCACCCACACGGCCGGCGGCT TCCCGCTGCAATTGCCGGAAACGGTGCGCAACCAGCGGCAACTGATCGACTACTACCGGGCCTGGCGGCCCAGCTCCGCCCCCGGCACCCAGCGCACCTA CGCCAACCCCAGCATCGGGCTGCTCGGCGTGGTGGCCGCCAAGAGTCTGGAACTGCCCTACGCCAAGGCGATGGAAACCCTGCTCCTGCCCAAGCTCGGC ATGCCCAACACCTATATCGAGGTGCCCGCCAGCGCCATGCCGCGCTATGCCCAGGGCTACGACAAGGCGGATGCGCCGGTACGGGTCAACCCCGCGCCCC TGGCCGCCGAAGCCTACGGGGTCAAGACCAGCAGCAAGGACCTGCTGCGTTTCGTCGAAGCCCAGCTCGGCCAGGGCGGGCTCGACGGGAAAGTCGAGCA GGCCATCGCGGCGACGCGCACCGGCTATTTCAAGGTTGGCGACATGACCCAGGCGCTGATCTGGGAGCAGTACAGCTACCCGGTGGCCCTGGACACCCTG TTGCGGGGCAATGGCAGCCAGATGGTGCTGGAGAGCCATCCGGTCAGCGCCATCGTGCCGCCCTTGGCGCCACAGAAGGAGGTCTGGGTGAACAAGACCG GCTCCACCAACGGCTTCGGCGCCTATGTCGCCTTCGTGCCGTCCCGGGGCGTCGGCATCGTGCTGTTGGCCAACCGCAACTACCCCAACGAAGAACGGGT TCGCCTGGCCTATCGCATCCTTGCCGAGCTGGATTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCCAGGGACAGGGCGCAGGTCAGGGCTGGAAGAAATCCCCGGGCGTCACGCCGAAGTGCTGGCGGAACGCGGCAATGAAGGCCGAGGTGGAATCGTAGCC ACAGGCGAGGGCGACCTCGGTGACCCGTCGGCCTTGCTCCAGGGCTTCCAGCGAGCCCAGCAGCCGCAGGCGCTGGCGCCAGGCGCGGAAGGTGAGCCCG GTTTCCTTCAGGAACAGGCGCCTCAGGGTCTTCTCCGAGGCGCCCAGGTCCAGGCTCCACTGCACCAGGGTGCGCTGGTCGTCCGGGGTTTCCTGTAGCT GCCGGCACAGGCGGCGCAGGCGCGTATCGCTGGGCAGGGGCAGCGACAGGCCAACACCCCGGGCCACGGCCAACTGGTCGAGCAGGACCTGGGCCAGGCG GCCGTCGGGTCCCTGCTCGTCGTATTCCACCGGCAGCTCGCAGAAGCGCCGGATCAACTCGCGGGTCAGCGCATCGATCTCGATGACCCGGCACTCCTGC
|
|
| Amino Acid Sequence |
>class C beta-lactamase
MRLTAKFLLLALACGHGGVTLADDQDAAVQRAARDLMQEYRIPGLAIAITAHGEQRFYNFGVASKESGQQVTQDTLFEVGSVSKTLTATLAGYAQANGRL DLGANPVRYLPELAGTALDKVSLINLATHTAGGFPLQLPETVRNQRQLIDYYRAWRPSSAPGTQRTYANPSIGLLGVVAAKSLELPYAKAMETLLLPKLG MPNTYIEVPASAMPRYAQGYDKADAPVRVNPAPLAAEAYGVKTSSKDLLRFVEAQLGQGGLDGKVEQAIAATRTGYFKVGDMTQALIWEQYSYPVALDTL LRGNGSQMVLESHPVSAIVPPLAPQKEVWVNKTGSTNGFGAYVAFVPSRGVGIVLLANRNYPNEERVRLAYRILAELD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|