Strain | Pseudomonas resinovorans NBRC 106553 DNA, complete geonome. [Details] | |
DNA Sequence Upstream of Gene |
GGCGGCCATTGAGCGAGCAGCGCGGGTTGACCATGGGCATAGCTCCTTCGCGAGCATTTGAGTGCGACCTGGGCAACTGCAAACTCGAATGGAGCTTATG CGTCGGTACCGGCTTCGGTAGTAGCGAGGATGTCGTCTGGCGGAGCAGGGCTCAAACACCAGGCGAAGATGAATCCAGCGTAGATGATAACTGTCGCAAT GTTACGAATCTTTTCGGGGCGGGAAGCGCATGGACTCGAATGCCGAATGACCGCGACACGAGTGAGCAACGCCGCCACGGACGGCGTACCCAAGGTTTCG GACGTATCGCTCTGTATCCGGCCTTCCCCCTCCCGCCATTCGCTTACAAATGCCACTGCTCACGGATACGCCACGGATACACGCCTGGGGCGAAATAGCC ACACCCGAACGAGGTCAGCCCCGGCGCCTCGTTCCAGGGTTCCAGCGCCCCCGTGGCCCACTCGTGCGGCTTGCCGCGCCCCGTATCCGGAGAAGACCCC
|
|
DNA Sequence for Gene |
>PCA10_RS15055
ATGTCCCGTTCCCCCATCCAGAACAAAACCCGTATCGGCCTGCTCGCTGTCGCCCTGGTGGGCGGCATCAACCTGGCCTCCAGCGCCTTCGCGGTAGAAG CCTTGCCCCAGGGCTACCAACTGGCCGCCGCCGACAAGGCCGGCGAGGGCAAGTGTGGCGAAGGCAAGTGCGGCGCCAGCGAAGCCAGCGGCAAGACCAC CCAGACCGAAGGCAAGTGCGGTGAGGGCAAATGCGGCGATGCTTCGTTCGCCCGCACCGATACCGACGACGACGCCCGTGTCTCGCTGAAGGAACTGCTG GCCGTGGCACCCCAGGGCGGCGAGGAATTCAAGGCGATGGACAGCAACAGCGATGGCTACCTGTCCGAGGGCGAGGTCTACAGGTTCCGCACCAACCAGT ACATCGAAAACGGCAAGAAAGTGCCCACCGAGCTGTTCACCAAGCTGAGCCAGGCGAAGAACTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
TCGGACTCCCCCCTCCCTGAGCCAGGGAGGGGGTCATACCCGCTGGAGACTGCCCATGACCGCTGCTTCGTTCCCACAGGGCGCAGGCCTTGGCCTGCGT CGCGCGTTGCTGCCCGAATTGCTGGCGATGGAGGCCGGTGCCGTGGACTTCCTGGAATGCACCCCCGACAACTGGATCAAGGTGGGCGGGCGCCATGGCG AGGGCCTGGCGCAGTTGGCCGAGCGTCATCGGCTGAGCTGCCATGGCCTGTCGCTGTCACTGGGCGGGCCGGCGCCGCTCGACCTTGAGCTGCTGCGGAA CACCCGCGAGTTCCTCGACCGGCACAAGGTCGCCTTCTTCAGCGAGCACCTGAGCTACTGCTCCGACGACGGGCAACTCTACGACCTGCTGCCGCTGCCC TTCACCGACGAAGCCGTACGCCATGTCGCCGCGCGCATCCGCCAGGCACAGGACGTCCTGGGGCGGCGCATCGCGGTGGAGAACATTTCCTACTACGCCG
|
|
Amino Acid Sequence |
>hypothetical protein
MSRSPIQNKTRIGLLAVALVGGINLASSAFAVEALPQGYQLAAADKAGEGKCGEGKCGASEASGKTTQTEGKCGEGKCGDASFARTDTDDDARVSLKELL AVAPQGGEEFKAMDSNSDGYLSEGEVYRFRTNQYIENGKKVPTELFTKLSQAKN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|