Pseudomonas resinovorans CA10 (NBRC 106553), PCA10_RS10260

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00196
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00072
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pre02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.50.2300 - - - 20 225 6.2E-54
SMART SM00421 luxrmega5 IPR000792 Transcription regulator LuxR, C-terminal 162 219 5.6E-22
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 19 191 4.84E-32
PANTHER PTHR43214 TWO-COMPONENT RESPONSE REGULATOR IPR039420 Transcriptional regulatory protein WalR-like 16 222 1.7E-38
PRINTS PR00038 LuxR bacterial regulatory protein HTH signature IPR000792 Transcription regulator LuxR, C-terminal 195 207 1.9E-11
CDD cd17535 REC_NarL-like - - 21 136 8.88756E-42
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 21 131 7.4E-28
PRINTS PR00038 LuxR bacterial regulatory protein HTH signature IPR000792 Transcription regulator LuxR, C-terminal 179 195 1.9E-11
Pfam PF00196 Bacterial regulatory proteins, luxR family IPR000792 Transcription regulator LuxR, C-terminal 165 219 9.9E-20
CDD cd06170 LuxR_C_like IPR000792 Transcription regulator LuxR, C-terminal 165 221 1.29093E-18
PRINTS PR00038 LuxR bacterial regulatory protein HTH signature IPR000792 Transcription regulator LuxR, C-terminal 165 179 1.9E-11
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 19 131 1.5E-30

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.