Pseudomonas resinovorans CA10 (NBRC 106553), PCA10_RS09275
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas resinovorans NBRC 106553 DNA, complete geonome. [Details] | |
| DNA Sequence Upstream of Gene |
TCCGCCACTGCTGGACCGAGCGCCGCATGACCCCGCTGAACATCTACCTGGAAAGCGCCAGCGAAGCCCAGGTGCACGAGGCGCTCTACGACTACGGCCT GGCCATCAAGCAACTGGCGGCGGCGAACATCTTCCCCGGCGACATGCTGCTGAAGAACTTCGGCGTCACCCGCCATGGCCGGGTGGTGTTCTACGACTAC GACGAGATCAGCTACCTGACCGAGGTGAACTTCCGCGTCATCCCGCCGCCGCGCTACGAGGAGGACGAGATGTCCGCCGAGCCCTGGTATTCGGTGGCGC CCAACGACGTGTTCCCCGAGGAATTCCCGCGCTTCCTGTTCGCCGACATGGGCCAGCGCCGCCTCTTCAACCAGCTGCACGGCGACCTCTACGACGCCGC GTACTGGAAAACCCTGCAGGCGGCCATCCGTTCCGGCAAGGTGATCGATGTCTTCCCCTATCGGCGCCAGGAGCGGGAACTGACGGAAGCCATCCAGTAG
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| DNA Sequence for Gene |
>PCA10_RS09275
ATGATCGAGCACGTATTTTCCCGCGCCACCTGGCTCAACTCCCTGCACATGTCGGCCCTGACCGTGGCCCTGTTGCAGGAAGAGGGCATCGCCGCCTGCG ACCTGCTGGCCGGCAGCGGCATCAGCGAGCAGGACCTCCTCGAATTGCAGCGCCTGATCAACCCCGACCAGGAGCAACGGGTCTACGCCAACGCCGTGCG CCTGGCACCACGGGTGGCCCTGGGCCTGACCCTCGGCCTGCGCACGCGCATTTCCGCCTACGGCCTGCTCGGCTACGCCATGCTGTCCGCGCCGACCTTC GGCGAGGCCCTGCGCGTTGGCCTCAGTTACCCGGTGCTGCTGGGCACCTACTTTCGCCTGGCCCTGGAACAGGACGGCGACACCGTCTGGCTGAGCGCCG CCGGCTACAGCGAGGACGAGTCCCTGCGGGCCTTCAACACCGAGCTTTGCCTGGGCTCGCTCAAGGTGACCTTCGCCGACCTGCTGGGCCAGCCCCTGCC GCTGCGCGCGGCGCGGTTCGACTACCCGGCCGTCAGCGGCATGGCGCGTCCCTACGGGCGGGGCTTCGGTTGTCCGGTGGAGTTCGGCGCCACCCCCAGC GCCATCGGCTTCGACGCCGCCTGGCTGGACCGCCGCCTGCCCCTGGCCGACCCGGTGACCCACAAGGAAATGCTCGAACAGTGCCGCCGCCAGAACGTCG AGTTCGCCGCCCGCCGCGCCTGGCTGGAGCGCGTGCGCGGCCTGCTTGCCGCGCGCCTGCAGGAGCCGCCGGGCCTGGAAGAACTGGCCAGGCAGATGAA CTGTTCCGCACGCAGCCTGCGCCGCCACCTGGCCCAGCAGCAGACCAGCTACCAGCAGCTCTTGGACGAACTGCGCTTCACCCGCGCCAAGGAAATGCTC CAGCAGGGCGACATCCCCATCTACCGCATCGCCGAGGCGCTCGGCTTCAGCGAAACCGCCAGCCTGCGCCACGCCTTCCAGCGCTGGAGCGGCCAGCCGC CGAGTCATTTCCGCGGGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGCAGGGACCTGTTCGTAGCGAATCGTAGGATGGGTTGAGCTAGCGATACCCATCAACCCTGTCCGCATGGGTATCGCTTCGCTCAACCCATCCTACGCA GCTACGCCGCAGCGGCCCGGGTTGCCGCGCGCAGGGCGGGGATCAGCTCGTGGGTCAGCCACTGGCGCAGGTTGCGGTTTTCCGGGTGGTAGAAGCGCCG CAGGATCAGGTCGTAGGCGCCGGATTCGCTGATCATCAGCTCTTCCCCCACCAGGCCGCGCCCGCACCTGAGCAGGCCGGTGCGCCATTGGTCGGCGTCG AGGCCGTCGTTGAGCCGGACGTTGGCTGACACGCCCAGCAGACGGGCGAGGTCGCGGGCGGCGAACCAGGGTTCCTGGCCGATGAGGGTGGCGCGCAGCA GGCGGCCGTGGCGGAAGAACTGGAGGGTCTCGTAGTAGCGATGGCTCATGGTGCAGCTCCCTGTGAGCGTTTGCGGAGCCGCCATCCCGTGAGAGGAGAA
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| Amino Acid Sequence |
>AraC family transcriptional regulator
MIEHVFSRATWLNSLHMSALTVALLQEEGIAACDLLAGSGISEQDLLELQRLINPDQEQRVYANAVRLAPRVALGLTLGLRTRISAYGLLGYAMLSAPTF GEALRVGLSYPVLLGTYFRLALEQDGDTVWLSAAGYSEDESLRAFNTELCLGSLKVTFADLLGQPLPLRAARFDYPAVSGMARPYGRGFGCPVEFGATPS AIGFDAAWLDRRLPLADPVTHKEMLEQCRRQNVEFAARRAWLERVRGLLAARLQEPPGLEELARQMNCSARSLRRHLAQQQTSYQQLLDELRFTRAKEML QQGDIPIYRIAEALGFSETASLRHAFQRWSGQPPSHFRG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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