Pseudomonas resinovorans CA10 (NBRC 106553), PCA10_RS08490
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas resinovorans NBRC 106553 DNA, complete geonome. [Details] | |
| DNA Sequence Upstream of Gene |
GCGCCCCAGGGGCACACCGGCGATGGCGTAGACCAGGGTGAAGGCGGTACCGATCAGGCCCAGCTGGAAGTCGCTCAGGCTCCACTCATGGCGCACCGGC TCGATGATGATGGCCGGGATGGTCCGGTCGAAGAAATTGAACAGGTTCGCCAGGAACAGCAGGAAGAGCACGCGCCAGGCATTGGCCGCTTGAGGGGATT GCTGCATGTGTCGGTCTCGTTTTTGTTGTCAGGCGCCCGGGCAACCGCCGGCCGGGCTCGATTCCGCAATCTAGAGGCTTCGCCCGCCGGCTGTCTGCGA AAATTCGTGGCATTTATGTAACCCGATGCTGCCGCCACAAGGGCACCGGCACCCGGCGCGACCGATCACCCCCCAAAGACAACCGTTCAGCGCCCGGGCA CGGCCGTCCCAGATTTGCCTGCCATGCTTTCGAAGTTGAAGTCATTGTGCCAGCACCCTCCCTTACCCGACGTTGCATCGCCTGCATGGGGAATCCCACT
|
|
| DNA Sequence for Gene |
>PCA10_RS08490
ATGGACTGGTTGGGCCTGCGTTTCGGTACCGAACTCCCCGCTGACGGCCAGGTACTGCTGGCCTGCACGCACAATAGCTGGCTGGTGCTGCTGGCCTTCC TGGTCGCTTCGGGAGCCGGTTACTGCGCCTTCGACATGGCCGAACGGGTGGCCCATGCCCAGCAGCCGGAAATCCGTCGACGCTGGACCTGGCTCGGCGC CTGTTGCCTGGGCGGCGGCATCTGGGCGATGCACTTCATCGCCATGCTGGCCTTCGAGGCGCCGATCGCCATCGACTACGACATCCCCACCACCGCCCTC TCCCTGTTGCTGGTGCTGGCCGTCTCGCTGGTGGGCATGCACACCCTTGGCCGCCCCAGCGCGGAACCGCGCCACTACTTCGCCGCCGCGCTGACCGTCG GTTTCGGCATCGCGGCCATGCACTACTCCGGCATGGCCGCGATCCGCTCGGTGGCGACCCAGTACTACCACCCCGGCATGGTCGCGATTTCTTTGGGCGT CGCCATCGCCGCCAGCCTGGCGGCCATGCTGCTGTCGAGCTTCTTCCGCGAACGCAGTGACAGCCACAAGCTGCTCAAGATCCCCGCCAGCCTGGCCATG GGCGGCGCCATCTGCAGCATGCACTTCACCGGCATCCTGGCCCTGCAACTGGCGGTTCCGGCAGGTACCGAACTGCACCTGGAGCGAGCCGACAACGCCT TGCAACTGGGCCTTAGCCTGGCGGTGATCGCCGGCATCGTGCTGGTCTTCGCCTTCTGCGTGGTCTGGACCGACAAGAAGCTCCAGGGCAAGGAGCGCGA CCTGCTGCATGTCAGCAACCTGCTGCGGGAGCTGGAGCAGGTGAAGGTCAAGCTGCAGAACGTCGCCCATTACGACGCCCTGACCAACCTGCCCAACCGC CGCGCCTTCAACGAATTTTTCGCCGAGAAGCTGAAAAGCCACGCCGAGCACCGGCAATCCATGGCGGTCATGTTCCTCGACGTGGACCACTTCAAGCGCA TCAACGACAGCCTCGGCCACGACGCCGGCGACGAGCTGCTCAAGGTGGTCGCCGACCGGGTACGCGGCGTACTGCGTCGCGAGGACGTGATCGCCCGCCT CGGCGGCGACGAGTTCTGCGTGCTCGCCAGCCTGGTCAACCTGAGCGAAGCCAGGGCGCTGTCCCAGCGCATCATGCAGCGGATGATGGAACCCATCACC CTGGCTGGGCGCAATGTCACCATGACCACCAGCATCGGTATCAGCCTCTACCCCGATGACGGCGAGACCTGCGAGGAACTGCTCAAGCACGCCGACCTCG CGCTCTACCAGGCCAAAGGCAGCGGGCGCAACAACCTGCATTTCTTCAGCCGCCACCTCAAGCACAAGGCCACCTTCGAGCTGCAACTGGAAGAAGAACT GCACAATTGCCTGGCCAGGGACCAGGGCCTGTTCCTCGCCTACCAGCCCATCCTCGACCTTCACACAGGCCAGGTGACCAAACTGGAAGCCCTGGTGCGC TGGCAGCACCCGCAGCTCGGCCTGTTGCCGCCGGACCGCTTCATCGGCGTAGCCGAAGCCAATGGCTTCATCGCCAAACTGGATGCCTGGGTGCTGCGCA GCGCCTGCCGCGACCTGGCCAGCCTGGCCGCCCAGGGCTTCCACGACCTGCGGGTGGCGGTGAACTGCTCGGCGCTGAACCTCAGTCGCGACGAGCTGCC GGATGAGGTGGAGAGCGCCCTGCGGGAGTCAGGCATACGTGCGCAGCGGTTGGAGCTGGAGGTGACCGAGAACGCCCTGATGCGCAACGTCAACCAGGCC CTGCTGCTGCTCGAACGCATCCGCGGCCTGGGTGTGAGCATCTCCATCGACGACTTCGGCACCGGCTACTCATCCCTGGCCTATCTCAAGCGCCTGCCGC TGGACACGCTTAAGGTCGACCGCTCCTTCGTGATGGACATTCCCGGCACCCGCGCCGGCATGGAAATCGTCCAGGCCATCATCGTCATGGCCCACACCCT GCAACTGCAGGTAGTGGCCGAAGGGGTGGAGACCCGCGAGCAGCTCGAATTCCTTCGCGCCCACGGCTGCGACTTCATCCAGGGCTACCTGCTGAGCCGC CCGCAGCCGCTGGCGGTGATCGAAGAGTTCCTGCGCCATCCCCATGGGCTGGGCGCAAGCAATGTGCTGCCGTTGCGCCCGGCGGACTCGAATCCGGCCT GA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TCCCGCTCCGCGTCTATCCGGCGGCACCCCGTAGGAGCGAATTCAGTCGCGAAACGGGCCGCAGGCTCGCCGGCGGATCTCCAGGGGGCTGCGTTGCAGC CCTTCGCGATTGAAATCGCTCCTACAGTCAGCAACCCGGTTCGAGGTTCAGCGTCCAACCGGCCTGCGCTGGCGCAGGTATTCCAGCACCGCCGCCTGCT CCCCCGCGAACTCGATGCGCGCGGCCTTGCTCTCGCGCTGGAAGGCGTACATGGGGTCGTAGTACTCGCGAAGCAGGCCCTCGATCCAGCCACGATGCAG CTCCACCTTGCCGGTGGCCTCCTGCTCGGCCAGGGCCTGGTCCATCAACGCCGCCATGCGCTGGTGGCGCTCGCCGCCAAGGCGTTTGACGATATTGGCC AGACTCTGCCGCAGGCGCGCGGCGAAGCGCGCAAAGCCATGCTCCTCGCCATGGGCGGCGATGAACTCGGCGCAGAGGTTCACCACGTAATCGCGCAGGA
|
|
| Amino Acid Sequence |
>diguanylate cyclase
MDWLGLRFGTELPADGQVLLACTHNSWLVLLAFLVASGAGYCAFDMAERVAHAQQPEIRRRWTWLGACCLGGGIWAMHFIAMLAFEAPIAIDYDIPTTAL SLLLVLAVSLVGMHTLGRPSAEPRHYFAAALTVGFGIAAMHYSGMAAIRSVATQYYHPGMVAISLGVAIAASLAAMLLSSFFRERSDSHKLLKIPASLAM GGAICSMHFTGILALQLAVPAGTELHLERADNALQLGLSLAVIAGIVLVFAFCVVWTDKKLQGKERDLLHVSNLLRELEQVKVKLQNVAHYDALTNLPNR RAFNEFFAEKLKSHAEHRQSMAVMFLDVDHFKRINDSLGHDAGDELLKVVADRVRGVLRREDVIARLGGDEFCVLASLVNLSEARALSQRIMQRMMEPIT LAGRNVTMTTSIGISLYPDDGETCEELLKHADLALYQAKGSGRNNLHFFSRHLKHKATFELQLEEELHNCLARDQGLFLAYQPILDLHTGQVTKLEALVR WQHPQLGLLPPDRFIGVAEANGFIAKLDAWVLRSACRDLASLAAQGFHDLRVAVNCSALNLSRDELPDEVESALRESGIRAQRLELEVTENALMRNVNQA LLLLERIRGLGVSISIDDFGTGYSSLAYLKRLPLDTLKVDRSFVMDIPGTRAGMEIVQAIIVMAHTLQLQVVAEGVETREQLEFLRAHGCDFIQGYLLSR PQPLAVIEEFLRHPHGLGASNVLPLRPADSNPA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|