Pseudomonas resinovorans CA10 (NBRC 106553), PCA10_RS05895
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas resinovorans NBRC 106553 DNA, complete geonome. [Details] | |
| DNA Sequence Upstream of Gene |
CGCTGGTACGGCAACAACCTGCGGCAGAACTCCCGCGCCCTGGCGCTGGGTCCGCGCCGTCTCGGCTGGTTCACCACCGTGGTGCTGGCCGACCAGCGCG CCTCCATGTGGACCTGCCTGCTGGGCCTGGCCGTGGCCATCATCGCCAGCCTGAAGTACAGCATCGCCTACCTGCTGGTGTACCTGTTGTGGATAGGCCT CACCCGCCTGGTCCTGACGCTGCTGCTGAGCATTACCGGCCACCGGATCGGGCCGGCCTACCCGCTGATCCTCTATTACAACCAGATCGTCGGGGCCCTG GTGAAGATCTACGTCTTCTTCCGCCTCGACCAGCAGTCCTGGACCCGCCAGAACACCAAGCTCAACCGTGACCTCGCCAGCTTCTCGCGCTGGTTCAACA CCTGGTCCTCACGCGCCATGACCTTCTCCGCAACCAGCGTGTTCATCGCAACGCTGCTGGCGATCGTGTGAGCACAAGGAACCCGACAGGAATCGAAGCC
|
|
| DNA Sequence for Gene |
>PCA10_RS05895
ATGAATACAGCCGTCAATCTCAATGTGGTGCATGAATCCGAAGCCCAGCGCCAGCACGCGCGGGTGAAGATCCCCGGCAAAGTCCGCTATATCGCCCGAG GCGAGCGCTTCGAAGCGTCGCTGCTGGACGTCTCCGCCGGCGGCTTCGCCTTCACCGGCGGACGCTCCGGCGCCGCGATCGGCGACCATCACAAGGGCCG CCTGATGTTCCAGATCGACGGCCTCAGCCTCGGCCTGGACGTGGAGTTCCAGGTGCGCGCCGTCGACAGCCGCAACGAGCGCATCGGCTGCGTCTTCCAC AACCTGCATCCGCGCGACATCGCCACCCTGCGCTACCTGATCAGCTCCCACCTCTCGGGCGAGCTGGTCACCGCCGGCGACCTGCTCAACACCCTGCAGC GCGAGAACTTCACCAAGCCGCGCAAAGGCGGTGCCGGTGGCGGCATGGGCGCCCTCGCCCGCCTCAAGGCCGTGGGCTTCAGCCTCGGCATCTTCGTCAT CGGCGTCGGTGCCTTCGGCTACATCGGCAAGTCCCTCTACGGCCTGTACTTCGTCACCCATGCCGACTCGGCCATGGTGGCGGTGCCGTCCCTGCAGGTC ACCATGCCCCGCGAAGGCACGGTACAGAGCCTGGTCGGCCCCGACGCCACGGTGAGCAAGGGCGCCCCCATCGCCTCCTTCAGCGCCACCATGCTGGAAA TGCTCAAGGGCCACCTGACCGACGACCAGCTCACTCCGGGCAACGTCGAAGAGCTCTTCGGCAAGCAGATGAAAGGCACCCTCACCAGCCCCTGCAACTG CAAGATTTCCCGCCAGCTGGTGGCCGACGGCCAGTTCGCCAGCAAGGGCGACGTGATCTTCGAACTGGTGCCCCAGGACAGCCTGGCCACCGTGCAGGCG CGCTTCCCCTTCCGCAACATCGCCCAGGCCCGTCCCGGCGCCCGCGTCACCTTCCAGGTGGCCGGCGAAGACCAGGTACGCCACGGCAAGATCCTCAGCA GCAACCTGCATGACGGCAGCATGTCCGCCGACATCCGCGCCACCATCCAGCCCGACGAGCCGCTGCCCAGCACCCTCGCCGGCCAGCCGGTTGACGTGAG CATCGATCGCGGCCCGTCCATCGACTGGTTCGTCGATCGCGCACTGGCCGCGGGCTTCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GGAGGGCGCAGCCATGGTCCATCACGCCACCCCCGTCCTGCTGCTGGCAGCCGCCGTCGCCCTCGCGGGCTGCGCCGGCCTGCCCGATGAGCGCCTCGCC CGCGAGGCGCTGCAGCGTGGTGACAACACCACCGCCGAGCAGAACTTCCGCGAACTGGCCGACCTCGGCTATGCCGACGCCGCGGTCGGCCTGGCCGACC TGCAGGTGGCCAGCGGCGATCCCGCGCAGTTGCAGAAGGCCGAGCAGACCTACCGCCAGGCCATGGACCAATCGCCCCGCGCCAAGGCGCGCCTCGGCAA GCTGCTGGCGCGCAAGGCCGACCTGAACCCGGCCGAACGCCGCGAAACCGCACAATTGCTGGAGGAGTCCTTCGAGGCGGGTGAACAGAGCAGCCTGCTG CCGCTGGTGATGCTCTACCTGCAGTACCCGCAGGACTTCCCCTCGGTGAACGTGCCGGAACGCATCAAGCAGTGGCGCGCCGAAGGCCATACCCAGGCCG
|
|
| Amino Acid Sequence |
>alginate biosynthesis protein Alg44
MNTAVNLNVVHESEAQRQHARVKIPGKVRYIARGERFEASLLDVSAGGFAFTGGRSGAAIGDHHKGRLMFQIDGLSLGLDVEFQVRAVDSRNERIGCVFH NLHPRDIATLRYLISSHLSGELVTAGDLLNTLQRENFTKPRKGGAGGGMGALARLKAVGFSLGIFVIGVGAFGYIGKSLYGLYFVTHADSAMVAVPSLQV TMPREGTVQSLVGPDATVSKGAPIASFSATMLEMLKGHLTDDQLTPGNVEELFGKQMKGTLTSPCNCKISRQLVADGQFASKGDVIFELVPQDSLATVQA RFPFRNIAQARPGARVTFQVAGEDQVRHGKILSSNLHDGSMSADIRATIQPDEPLPSTLAGQPVDVSIDRGPSIDWFVDRALAAGF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|