Pseudomonas resinovorans CA10 (NBRC 106553), PCA10_RS01705

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.20.120.160
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004673 protein histidine kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016310 phosphorylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006935 chemotaxis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00260
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00260
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pre02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pre02025 Biofilm formation - Pseudomonas aeruginosa 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd16916 HATPase_CheA-like - - 2204 2379 1.75687E-81
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 2550 2661 3.5E-27
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 2548 2661 1.3E-36
Pfam PF01584 CheW-like domain IPR002545 CheW-like domain 2387 2520 1.6E-22
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 2195 2381 1.1E-53
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1534 1655 3.27E-25
Coils Coil Coil - - 1132 1152 -
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1035 1167 3.1E-28
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1334 1453 2.0E-14
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1536 1636 1.8E-13
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 2547 2666 2.7E-37
SMART SM00260 chew_2 IPR002545 CheW-like domain 2374 2518 5.7E-33
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 7 130 7.46E-22
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 433 557 1.06E-13
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 2286 2300 1.1E-10
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1744 1844 1.0E-14
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1892 1995 1.2E-19
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 2245 2381 2.5E-14
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1892 1992 1.2E-14
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1891 2004 6.9E-24
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1742 1863 1.96E-26
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1534 1632 1.0835E-12
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1534 1631 2.7E-6
Gene3D G3DSA:2.30.30.40 SH3 Domains - - 2456 2516 2.1E-20
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 2366 2379 1.1E-10
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1194 1330 1.4E-18
SMART SM01231 H_kinase_dim_2 IPR004105 Histidine kinase CheA-like, homodimeric domain 2057 2196 6.5E-11
SUPERFAMILY SSF50341 CheW-like IPR036061 CheW-like domain superfamily 2381 2514 1.11E-23
Coils Coil Coil - - 1973 2000 -
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1193 1280 7.12407E-7
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1034 1132 2.2E-9
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1534 1665 5.6E-27
Coils Coil Coil - - 2095 2115 -
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1742 1840 7.93279E-13
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1037 1122 1.3E-11
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1193 1289 0.0082
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 14 135 4.1E-10
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1195 1287 3.1E-13
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1035 1133 2.58704E-9
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1335 1462 2.3E-13
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1742 1839 5.9E-4
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1736 1868 6.4E-29
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 2241 2382 4.7E-23
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1193 1315 6.15E-19
Coils Coil Coil - - 1898 1918 -
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1034 1159 2.85E-26
FunFam G3DSA:3.30.565.10:FF:000016 Chemotaxis protein CheA, putative - - 2197 2381 3.4E-62
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1891 1988 1.8285E-11
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 10 98 1.0E-6
PANTHER PTHR43395 SENSOR HISTIDINE KINASE CHEA - - 1740 2665 0.0
Gene3D G3DSA:3.40.50.2300 - - - 2550 2668 6.3E-41
CDD cd17546 REC_hyHK_CKI1_RcsC-like - - 2550 2661 1.11274E-31
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 2198 2379 4.85E-37
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1890 1991 3.6E-6
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 2342 2360 1.1E-10

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.