Strain | Pseudomonas aeruginosa LESlike4 sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGGGTTGCTCAGCGACTCCATCCGCCACTCTTTGCGGGCGATAGTGAAGACATGGGAAATTAGGGCTAGCTCACGGCGAACCGTGGCTGGTGCGAGGCCT TCAGCTAGGCGCTCGTCTCGATAACCAGCCATGTCTGCTCCTCGGATGCTTGCAATTGATCTGAGGGCTAGCGGGTGACGTAGCAAGACCTTAATGCGAG AAAGCTCAGAGTCGCTGCTTCTCTTTTTTGAGGTCACTTGTTCAGCGTACATCTCTAGGGCGTTGGCGAATGAGGTCGATTCGGCTTCGTTGCGGCTGAC GAACACCCCGGCATCCATTTCACGCTCGATCATGGTTGCCCATGTTTTCGCTTCGGCCTGGGTGTTGAACGTCTTGGTCTGCAGGGGCCATCCTTTACGT CTGACCTGCACTTGCCACTGGGATGGGCCGCGTTTGCGAAGGGTCGCCATTTCTAATCTCAGTGTGACAAAATTGTGCCAAATATCATAAAGGAATACCT
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DNA Sequence for Gene |
>T226_RS53390
ATGGAAGCCGCAAAACCCGCGTTAATTCGCGAAACCTTCCCCGTCGGGCCTTTGCAGTGCAACTGCACCATCATTGGCGATCCGCTGACCAGGAAGGCCA TCGTCGTCGATCCGGGCGGCGACCACGAACTGATCCTGCAGCGCCTCGACCGCCTCGGCCTGCAGGTGGTCAGCATCATCCATACCCACGCGCACCTGGA TCACTTCCTCGCCTCCGGCGAGATGAAGAAGCGCACCGGCGCCAGCCTGCACCTGCACAAGGACGACCAGTTCCTCTGGGACAACCTGGAGATGCAGTGC CAACTGTTCGGCGTGCCCTACACGCCGGTGCCGGCCCCGGACCGCTGGCTGGCCGACGACGAGGAACTGGCCTGCGGTTGCGGAGTGGCACTGCACACGC CGGGGCATACGCCGGGCTCGATGAGTTTCTGGTTCCCCCGGGCGAAGCTGCTGATCGCCGGCGACACCCTGTTCCGCCGTGGCATCGGCCGCACCGACCT GTGGGGCGGCGACTCGGCGGCGATCCAGCGTTCGATCAGGCAGCGTCTGTACAGCCTCGACGAGGACGCCACGGTGGTCGCCGGCCATGGCCCGGATACC ACGCTGGGCGAAGAGATGCGCGAGAACCCCTTCGTCAGGGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AAAGGATTTTTCCTAGCATCGGGAATTTTGCCACTTGGCTATGCTCTAAGATATCGGCCGCCCCTCACGCAGGGGCGTTTCAGTACCTCGAGGAGTAGTT TTCCCATGTTCACCTCCCGTTGCCTGCCTCTGGCCGCAGCCGTCACCGCACTGGCGCTGCTCGCCGGTTGTGCCAACAACAACCCCTACGACACGCAAAG CCAAAGCCAGGGTGGCATGAGCAAGACGGCCAAGTACGGCGGACTGGGTGCGCTGGCCGGCGCCGTCGCCGGCGCTGCGATCGACCACAACAACCGTGGC AAGGGCGCGCTGATCGGCGCTGCCGTTGCCGGCGCGGCCGCCGCGGGTTATGGCTACTACGCCGACAAGCAGGAAGCCGAGCTGCGTCGGCAGATGGAAG GCACCGGCGTGGAAGTGCAGCGCCAAGGTGACGACATCAAGCTGATCATGCCGGGCAACATCACCTTCGCCACCGATTCGGCGAACATCGCCCCGAGCTT
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Amino Acid Sequence |
>MBL fold metallo-hydrolase
MEAAKPALIRETFPVGPLQCNCTIIGDPLTRKAIVVDPGGDHELILQRLDRLGLQVVSIIHTHAHLDHFLASGEMKKRTGASLHLHKDDQFLWDNLEMQC QLFGVPYTPVPAPDRWLADDEELACGCGVALHTPGHTPGSMSFWFPRAKLLIAGDTLFRRGIGRTDLWGGDSAAIQRSIRQRLYSLDEDATVVAGHGPDT TLGEEMRENPFVRG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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