Pseudomonas aeruginosa LESlike4, T226_RS52390
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa LESlike4 sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AAGGACCTGCGCGCGCGCCAGGAAACCCTGCAGTGGCTGTTCTGGCAGATGGGCGGGCTGGGGCCGATGGCAGGGCAGAACCACCATTTCAACCGCTTCG CCCCGGAGAAGATTCCCTACGCCATCGACCGGTACGTCAAGGAAACCGCGCGCCTGTACGGCGTTCTCGACCAGCGCCTGGCGGACCGCGCCTTCGTCGC CGGCGACGACTACAGCATCGCCGACATGGCCATCTATCCGTGGATCGTCCCGCACCAGTGGCAGGAGCAGGATCTCGCCGACTTCCCGCACCTGCAGCGC TGGTTCGAGAGCATTCGCCAGCGTCCGGCGACGCAACGCGCCTATGCTTTGGTGGAGCGCATCAATCCGCCGAAGTAGCGAGTCCCGAGCCGGCCTGCGG ACGTCCTCGCGGACGACCGCAGGCGGAGCTTGCGCAGCCCTGCGCTCCTCACTAACGTAGCGCCTCTCGACGCGACCACTCCCGCAGGAGCCCCCACCCC
|
|
| DNA Sequence for Gene |
>T226_RS52390
ATGGCCTCGCCAGCCTTCATGCGTTTTCTTCCCCGTTGCGGCGCCGCCGCGGCCTTCGGCACCCTCCTGGGCCTGGCCGGTTGCCAGTCCTGGCTCGACG ATCGCTACGCCGACAGCCTGCCGCCGACCTCCGGCGTGCAACCGATCAAGGGCCTGGCGCAAAACGTATCGATCCGGCGCAACGCGCTGGGCATGCCACT GATCGAAACCGGCACCTTCCATGACGCGTTGTTCGCCCTGGGCTACGTACACGCCTCCGACCGCCTGAGCCAGATGGTCAGCCTGCGCCTGCTGGCCCAG GGACGGCTGGCCGAGATGGTCGGCCCCGGCGCGCTGGAGATCGACCGTTTCATGCGTACCGTGAACCTGCGCCAGGCCGCGGAGATCCAGTACAGGAACG CCTCGCCGCGCCTGCAACGCTTCTTCGAGGTCTACGCGCGCGGGGTCAACGCCTACCTGTATCGCTATCGCGACAAGCTGCCGATGGACCTGGCCCAGTC CGGCTACCGTCCGGAATACTGGAAGCCCGAGGACTCGGCCCTGGTCTTCGCCCTGCTCAACTTCGGCCTGGCGGTGAACCTACAGGAAGAAATCGCCTCG CTGACGCTCGCGCAGAAGGTCGGCAGCGACAAGCTGGCCTGGCTGACGCCGACCTACCCCGACGAAAACCTGCCGTTCGACGAGGCGGAAAAGCTCAAGG GCCTGCGCCTGGACGGGCAGGTTCCCGGCCTCGCGGGCGTCGAGGGCGCGGCGCGGCAGGTCGCAGCGCTGAGCATGCTCGGGGTCGCCGCCTCGAACAA CTGGGCTATCGCGCCGCAACGCAGCCGCAGCGGCAAGAGCCTGATGGCCAACGACACCCACCTGCCGCTGAGCATGCCGTCGGTGTGGAACTACGTGCAG ATCCGCTCGCCCAAGTACCAGGCCGCGGGCGTTTCCATCGCCGGTCTGCCGGGCGTGGTGGCGGGCTTCAACGGCAAGCTGGCCTGGGGCATGACCATGG TCCTGGGCGACAACCAGGATCTCTACCTGGAACAGTTGCGACGCCAGGGCAACCGGCTCTATTACCTGGCCGACGGCAAGTGGCAGCCAACCCGCGAACG CCAGGAAACCTTCTTCATCAAGGGCCAGCGGCCGATCCGCGAGGTCATCCACGAAACCCGCCATGGCCCGCTGCTCAACAGCGCCCTGGGCGAGCGCAAG AACATCCTCCAGCCGCTGCCGCTGAAGAGCGGCTACGGACTGGCCTACCGGAGCATCCAGCAGGAAGCCGACAAGACCCTGGACGGCTTCTTCGACCTGT CGCGGGCCAAGACCATCGAGCAGGCCTTCGACGCCACCCGCGAGATTCGCGCGATGCCGCTGAACATCGTGTTCGCCGACGAAAAGCACATCGGCTGGCA GGTCACCGGACGCTATCCGAACCGCAAGGAAGGTCGTGGCCTGCTGCCCTCCCCTGGCTGGGACGGCCGCTACGACTGGGATGGCTATGCCGACCCGATC CTCCACCCGTCCGACCAGGACCCGCAGCAGGGCTGGCTGGGTACCGCCAACCACCGCACCGTGCAGCCCGGCTACGGCGCCCAGTTGTCCAACTCCTGGT ACTACCCGGAGCGCGCCGAGCGCATCGCCCAGCTCGCCGGTGCCAGCAAGAGCCACGACACCCAGAGCATGATCCGCATGCAGTACGACCAGACCTCGCT GTTCGTCGCCAAGTTGCAAGCCATGTTCGACAATCCCGGCATGGCGCTGCCGCTGCGCCAGGCCATCGACGCCTTGCCGGAGGCGCAACGCAGCCGGGCG CGGGAGGCCTACGACCGGCTGATGGCGTTCGACGGCAAGCTGACAGCCAGCTCCAGCGACGCCGCGCTGTACGGCGCCTTCCTCCACGAGAGCGCCAGGC AGATATTCCTCGACGAGCTAGGACCGGAGGACGGCCCTGCCTGGAAAGCCTTCGTCGAGACCGCCAACCTCTCCTACTCGGCGCAAGCCGACCACCTGCT CGGGCGCGACGACAGTCCGTTCTGGGACGATACCCGCACTCCGCAGAAGGAGGACAAGCCGGCAATCCTCGCGCGCAGCCTCGCCGCCGCCGTGGAGTTC TGCGAACAGCGACTGGGGAGCGAGCGCAAGGCCTGGCAATGGGGCAAGCTGCACACCTACGAATGGCAGAGCGACAGCTCGAAAATGGCCCCCTACCTGG GCGCCGGCGAGCGCGCCGGACTCGGCGCGATCAAGGGCTATCTCGATCGCGGACCCTATCCGGCCGGCGGCGACCACACCACGCTGGACGTATCGGCCTA CGGCTGGGGCCAGGACTTCGACACTTGGCTGATCCCGGCGATGCGGCTGATCGTCGACTTCGGCCAGAGCGAACCGATGATCGGCGTGAACAGCAGCGGC CAATCCGGCAATCCGGCCAGCCCGCACTACGCCGACGGTATCGACGCCTGGCTCAAGGGGCGCTACGTCAGCTTCCCGTTCCAGCCACAGAACCTCGATC GCGTTTACGGCAACAAGCGGCTGACGCTCACTCCCGCTCGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
ACGGACGGCGCGGAACTTTCCTCCGCGCCGTGGCTCTGAACAGCCGACTTACTCCATGATCATCTTCAGGGCGTCCTTCCGGACGCCCTTCTTTTATCCC CCTCCCGGAAAGCCTCCGTTTTCTCGAAAGCCCGGGCACGGGATCGAACCGATCTCACTCCTCTCCGGCCTCTTCCACGGGCGCCACCAGCGCCCGGTCC AGCCAGTCCGTCGGCAGGCTCTTGCTGGCGCGGGCACCGAGCAGCTTGAGTTGCTCGCTGCGACTGATCAGGTTGCCACGTCCCTCGGTGAGCTTGTTGC GCGCCGCGGCATAGGCCTTGTCCAGTTGCTGCAGGCGCGAACCGACCTCATCGAGGTCCTGGACGAAGAGCACGAACTTGTCATACAGCGAACCGGCACG TTCGGCGATTTCCCGCGCATTCTGGTTCTGCCGCTCCTGGCGCCAGAGGCTGTCGATTACCCGCAGGGTGGCCAGCAGGGTGGTCGGGCTGACGATCACG
|
|
| Amino Acid Sequence |
>acyl-homoserine lactone acylase QuiP
MASPAFMRFLPRCGAAAAFGTLLGLAGCQSWLDDRYADSLPPTSGVQPIKGLAQNVSIRRNALGMPLIETGTFHDALFALGYVHASDRLSQMVSLRLLAQ GRLAEMVGPGALEIDRFMRTVNLRQAAEIQYRNASPRLQRFFEVYARGVNAYLYRYRDKLPMDLAQSGYRPEYWKPEDSALVFALLNFGLAVNLQEEIAS LTLAQKVGSDKLAWLTPTYPDENLPFDEAEKLKGLRLDGQVPGLAGVEGAARQVAALSMLGVAASNNWAIAPQRSRSGKSLMANDTHLPLSMPSVWNYVQ IRSPKYQAAGVSIAGLPGVVAGFNGKLAWGMTMVLGDNQDLYLEQLRRQGNRLYYLADGKWQPTRERQETFFIKGQRPIREVIHETRHGPLLNSALGERK NILQPLPLKSGYGLAYRSIQQEADKTLDGFFDLSRAKTIEQAFDATREIRAMPLNIVFADEKHIGWQVTGRYPNRKEGRGLLPSPGWDGRYDWDGYADPI LHPSDQDPQQGWLGTANHRTVQPGYGAQLSNSWYYPERAERIAQLAGASKSHDTQSMIRMQYDQTSLFVAKLQAMFDNPGMALPLRQAIDALPEAQRSRA REAYDRLMAFDGKLTASSSDAALYGAFLHESARQIFLDELGPEDGPAWKAFVETANLSYSAQADHLLGRDDSPFWDDTRTPQKEDKPAILARSLAAAVEF CEQRLGSERKAWQWGKLHTYEWQSDSSKMAPYLGAGERAGLGAIKGYLDRGPYPAGGDHTTLDVSAYGWGQDFDTWLIPAMRLIVDFGQSEPMIGVNSSG QSGNPASPHYADGIDAWLKGRYVSFPFQPQNLDRVYGNKRLTLTPAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|