Strain | Pseudomonas aeruginosa LESB65 sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCACTGGGCGGGCAGCGCGTCGCCGCGGGTTCCCGCCACCCTCGACAGGCCAGGGTCGAGGCTTTCCGCGCGTGGCGCGGGTTGGTTGCGGTTCGCGCAG CCCAGCGCGGTGGAGATCCCCAGCGCCAGCGCCACGCAACGCAGATGACTGGCAAGCGGCATTGCCCTGCTCCCGTGTCTGAAAGAGCGGGGAACGGTAA GGCAGGCGCAGGCGGCCTGCGCCGGCAAAAGCGCCAGTCATCGTCGCGAAATGGACAGTCGGCGGATTTTTCAGCGTTGCCGCATCAGGTACGGGCCGCA GCCCGGCCGGGATGGCCAGCAGGGAGATGCGGTGGATCTGCCGGGAGCAGCGGTTCACCCCGCCTTCGACGAGGCGCAGGCGCTGGAACAACTGGTGGGC TAGCCTGCGCCTTGGCGTGGCCGGGGGCCCGCCTTCAACCTGAACGAAGCGTTTCGCCAGGCGGTCGGAACAACAGGTCCCCGTTACGGAAGCCGAGTCC
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DNA Sequence for Gene |
>T224_RS51385
ATGCCGCTGCGCCGTGCCGTTTTCGCCATCCTTTTCGCGTCCCTGGGCAGTCCTTTGGTCGCCGCCGAAACACCCCTGCGCCTGGAGCGCCTGGAGCGCT GCGGCGATCTCCTGGCCAGCGAGCGGCAGGAGTGGTGCCTGCGCGTGCGCGGCCTGGGCGCCGGCCTGCCGCGCCTGTTGCTGGACGGCCGCGAACTGCC GGCCACCGCCCTGCGGCGCGAGGGCGACGGCCTGCGGCTCCGCCTGGACCGCCGTGGCCACGCCAGCGGTCCGCTTTGGCTGGAGCAGGGCGGGCGCAGC AGCAATCCGGTATGGCTGACCCTGAACGGCAGTCATGTGCTCGCCGCCGGTCCCGACGAGGTGGCGAAGAACATGGATGGCCTGACCACCTACGTCGACC TGGTCAGCCTGTTGATCGAGGAGAACCACGACGGTCGCCGGGAGGCCGAACGCCTGGCCGATAAATATGGCGCGCGGGTGGTCGGCGCGATCCCGCCGTT GAACCTCTACCAGTTGCGCCTGCCGGCGCGCGACCTCGTCCAGCGCGACGCGCTGGTCCTCCGCATCGGCAGCGAGACCAGCGTGGACGCCGTGGTGGTG GAGGAGTCCGCGCCGGAGAAGGGCGAGGAAACCGAGGCGGCGCGCCGGCCCGTGGACAAGCCGGACAGCGACTCCGACGAGTGGGCGGCCAATCGTTTCA TGGACGCGGTGAACTATTACCAGCGTCGGGTCCGCGCCCGCCAGGCGCCGCTGGAGACCCGCCCGGTGCGCATCGGGGTGATCGAGCGCGACGTCGACTT CGACGCTCCCGACTTCGCCGACTACCTCGGCCCCTGCAAGGCGCCCGCACCGCGTACCTGCCTCTACGCGCGCGATGCCGAACGTCCCGACAACCACGGT TCGACGGTCGCCGGCATCCTCGCCGCTCGCTGGGACCAGGGCGGCAACAGTGGCTTCCTGCGTGGGCTGGACCGCGCCAGCCAGGGTTTCGAAGTGATCG TCGAGCGCAATTCGGACGCTGGCATCACGGCCAACGTCGCCGCCTCGGTGAACCTGGTGGAGGATGGCGTGCGGGTGCTCAACTGGAGCTGGGGCATCCA CCGCGTCGGCGCTCGCGACGTCGATGGCGACGAGGTGGATTCGCTGGTGCGCTCGGGGATTGCCATGAGCGGCTACGAGGAGTTGCTCGAGGAGTTCTTC CTCTGGCTGCGCAAGAAGCATCCGGACGTGCTGGTGGTCAACTCCGCCGGCAACGGCTCGTCCTACTCCGGTACCGACGAATACCGCCTGCCGTCCTCCT TCGTCACCGAGCAGTTGCTGGTGGTGGGCGGCCACCAGCGCAGCGAGCGCCAAGGCCTGGCGGTGGACGACCCGGCCTACGCGGTCAAGCGCAGCACCTC GAACGTCGACATGCGGGTGGATGTCACCGCCGCCGCCTGTACCCATGCCTCGACCCTGGAGCGGGACGCGCGGGGCGAGGTGCACTGCGGCACCTCCTAT GCCACGCCGATGGTCGCCGGCACGGTCGCCGCCATGCTTTCCCTCAACCCGCGGCTGCGACCCGAGGAGATCCGCATGCTGCTCCGGCGCAGCGCCATGA CCATCGGCGGCGACTACGATTTCGAGCCGGCCGATGCCGAGGACCTCACCGCACCGATCCTGCCCTCGGAGCGCGGCTACCGCCTGGACCACCGCGACGT CGGCCGCTCGGCGCGGCTGGACATGCAGAAAGCCCTGGACCTGGCGGTGAAGAGCCGCGAGCGCGTGCGTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGCGTTCCGCCGGCCCGGGGCCTCACGGCGAGGCTTCCAGCAGCCGGGCGAGGCGTTCGGCGAGTTCGTTGTGGCGGAACGGCTTGGTCAACACCTCGAA GCCGTTGAGTTGCTCGGGCCTGAGGTTGGCGTAGCCGGTGATGACCAGCACCGGCAATTGCGGGAAGCGCTGGCGCAGTTCCTCGGCAAGCTGCACGCCG GTCTTGTCGGCCATGAGATGGTCGGTGACCAGCAGGTCGGGCGCCAGGCCGCGCTCGACCTCGCCCAGGGCTTCCTCCGCCGACGCCGCCTCGCTGACCT GGTAGCCGAGATCGCCGAGCAGCAGCGCGGTGGTGTAGCGCACCATCCTGTCGTCGTCGACCAGCAGCACGTGGGTCGGCCGCAACGCTTCCGGTGCGTC CGGGCAGCTTTCTGCGGTGGATTGCGTCTGCTCCGCGGTGATCGGCAGCCAGATGCTCACCCGGGTCCCCTTGCCGATCTCCGAGTGGATGCCCAGGCCG
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Amino Acid Sequence |
>hypothetical protein
MPLRRAVFAILFASLGSPLVAAETPLRLERLERCGDLLASERQEWCLRVRGLGAGLPRLLLDGRELPATALRREGDGLRLRLDRRGHASGPLWLEQGGRS SNPVWLTLNGSHVLAAGPDEVAKNMDGLTTYVDLVSLLIEENHDGRREAERLADKYGARVVGAIPPLNLYQLRLPARDLVQRDALVLRIGSETSVDAVVV EESAPEKGEETEAARRPVDKPDSDSDEWAANRFMDAVNYYQRRVRARQAPLETRPVRIGVIERDVDFDAPDFADYLGPCKAPAPRTCLYARDAERPDNHG STVAGILAARWDQGGNSGFLRGLDRASQGFEVIVERNSDAGITANVAASVNLVEDGVRVLNWSWGIHRVGARDVDGDEVDSLVRSGIAMSGYEELLEEFF LWLRKKHPDVLVVNSAGNGSSYSGTDEYRLPSSFVTEQLLVVGGHQRSERQGLAVDDPAYAVKRSTSNVDMRVDVTAAACTHASTLERDARGEVHCGTSY ATPMVAGTVAAMLSLNPRLRPEEIRMLLRRSAMTIGGDYDFEPADAEDLTAPILPSERGYRLDHRDVGRSARLDMQKALDLAVKSRERVR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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