Strain | Pseudomonas aeruginosa LESB65 sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGGCTTCATGATCTTCATCCCGTTCCTGATCATCGACCTGGTGGTGTCCAGCGTGCTGATGGCGATGGGCATGATGATGCTGTCGCCGCTGATCATTTCC CTGCCGTTCAAGATCATGCTGTTCGTCCTGGTGGATGGCTGGGCGCTGATCATCGGGACGCTGGCGGGCAGTTTCGGCACCGTCTAGCGGTGCCGCCGGC TTGACGCGCCGCTGGCGCGCTGGAGAGAGACATGACCCCTGAGGTGGCACTCGACCTGTTCCGCGAGGCGTTGTGGCTGACGGCGATGATCGTCGGCGTG CTGGTGGTTCCGAGCCTGCTGGTCGGTCTCGTGGTGGCGATGTTCCAGGCCGCCACCCAGATCAACGAACAGACCCTGAGCTTCCTGCCGCGCCTGATGG TGATCCTGCTCACCCTGATCGTGCTGGGCCCCTGGCTGCTGCGGCAGCTGATGGAGTACACCCAGACGCTGATCGGCAACATCCCGCTGCTGATCGGCTG
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DNA Sequence for Gene |
>T224_RS50865
ATGCTGGAGCTGACCAACGCGCAGATCGGCGGCTGGATCGCCAGCTTCGTGCTGCCGCTGTTCCGGGTCGCGGCGCTGCTGATGACCATGCCGGTGATCG GCACCCAGCTGGTGCCGGTGCGGGTGCGCCTCTACCTGGCGCTGGGCGTCTGCGTGGTGCTGGTGCCGAACCTGCCGCCGATGCCGCAGGTGGACGCGCT GAGCATGAAGGCCATGCTGCTGATCGGCGAGCAGATCCTGGTCGGCGCCTTGCTCGGCTTTTCCCTGCAGTTGCTGTTCCACGCCTTCGTGATCGCCGGG CAGATCATCTCGATGCAGATGGGCCTGGGCTTCGCTTCCATGGTTGACCCGGCCAACGGCGTCTCGGTGCCGGTGCTCGGCCAGTTCTTCACCATGCTGG TGACGCTGCTGTTCCTGGCGATGAACGGGCACCTGGTAGTGTTCGAGGTAATCGCCGAGAGCTTCGTCACCCTGCCGGTGGGCGAGGGCCTGAGCGGCAA CCATTTCTGGATCATCGCCGGCAAGCTCGGCTGGGTGATGGGCGCGGCACTGCTGCTGGCGCTGCCGGCGATCACCGCGCTGCTGGTGGTGAACCTCGCC TTCGGCGCCATGACCCGCGCGGCGCCGCAACTGAACATCTTCTCCATCGGCTTTCCGTTGACCCTGGTGCTGGGCCTGGTGATCCTCTGGATCGGCACCG CCGACCTGCTCAGCCAGTACCAGGTGCTGGCCGGCGAGGCCCTGCAATTCCTCCGTGAACTGGTGCGGGCGAAATAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCATGGCCGAGAGCGAGAGCGGGCAGGACAAGACAGAGGAACCCACGGAGAAACGCCGCCGCGAGGCGCGCGAGAAAGGGCAGTTGCCGCGTTCGCGGGA GCTGAACACCCTGGCCATCCTCATGGCCGGCGCCGGCGGCCTGCTGATCTACGGCGCCGACCTGGCGGGCGCCCTGTTGCGCCTGATGCGCAGCAATTTC GAGCTGTCCCGGGAAACCGCGATGAATACCGAGAGCATGCTGCAATTGCTCGGCGCTTCGGCCTACCTGGCTGCCCAGGGGCTCTGGCCGATCCTGCTGA TGCTGCTGGTGGCGGCGATCGTCGGGCCGATCGCCCTCGGCGGCTGGCTGTTCTCGATGGACGCCCTGCAACCCAAGTTCAGCCGGCTCAACCCGCTGTC GGGGCTGAAGCGGATGTTTTCCGCCAAGTCGCTGCTCGAACTGAGCAAGGCGCTGATCAAGTTCCTGGTGGTGCTGGCGGTGGCCCTGCTGGTGCTCTCC
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Amino Acid Sequence |
>flagellar biosynthesis protein FliR
MLELTNAQIGGWIASFVLPLFRVAALLMTMPVIGTQLVPVRVRLYLALGVCVVLVPNLPPMPQVDALSMKAMLLIGEQILVGALLGFSLQLLFHAFVIAG QIISMQMGLGFASMVDPANGVSVPVLGQFFTMLVTLLFLAMNGHLVVFEVIAESFVTLPVGEGLSGNHFWIIAGKLGWVMGAALLLALPAITALLVVNLA FGAMTRAAPQLNIFSIGFPLTLVLGLVILWIGTADLLSQYQVLAGEALQFLRELVRAK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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