Strain | Pseudomonas aeruginosa LES400 sequence. [Details] | |
DNA Sequence Upstream of Gene |
CAACCTGGCGATCGATACCGAACCCTTCTGGGGCAAGGACGGCTCTACCCTGTACTTCACCTCGGACCGTGGCGGCAAGCCGCAGATCTACAAGATGAAC GTGAACAGCGGTGCCGTGGACCGGGTAACCTTCATCGGCAACTACAACGCCAACCCGAAACTCTCGGCCGACGAGAAGACCCTGGTAATGGTCCACCGCC AGCAGGGCTACACCAACTTCCAGATTGCCGCCCAGGACCTCCAGCGCGGCAATCTGCGGGTGCTGTCGAACACCACTCTGGACGATTCGCCCACTGTTGC GCCCAATGGCACCATGCTAATCTACGCCACCCGCCAGCAGGACCGGGGCGTGCTGATGCTCGTATCCATCAACGGACGCGTACGGATACCTCTCCCTACC GCTCAGGGCGATGTGCGCGAGCCTTCCTGGTCCCCTTACCTGAACTGACGGTCGCCAACGGTTACAAACTTATACACTGGGGTTCATTAGGAGTTACATG
|
|
DNA Sequence for Gene |
>T222_RS53650
ATGGAAATGCTGAAATTCGGCAAATTTGCTGCGCTGGCTCTGGCCATGGCTGTGGCTGTGGGTTGCTCCTCCAAGGGCGGCGATGCTTCCGGTGAAGGTG CCAATGGCGGCGTCGACCCGAACGCAGGCTATGGCGCCAACAGCGGTGCCGTTGACGGCAGCCTGAGCGACGAAGCCGCTCTGCGTGCGATCACCACCTT CTACTTCGAGTACGACAGCTCCGACCTGAAGCCGGAAGCCATGCGCGCTCTGGACGTACACGCGAAAGACCTGAAAGGCAGCGGTCAGCGCGTAGTGCTG GAAGGCCACACCGACGAACGCGGCACCCGCGAGTACAACATGGCTCTGGGCGAGCGTCGTGCCAAGGCCGTTCAGCGCTACCTGGTGCTGCAGGGCGTTT CGCCGGCCCAGCTGGAACTGGTTTCCTATGGTAAAGAGCGTCCGGTCGCTACCGGCCACGACGAGCAGTCCTGGGCTCAGAACCGTCGCGTCGAGCTGAA GAAGTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GAAGTCGTTATGCCCAAGCACCTGCGTGTCCTGACGTTCCTCGCGCTCAGCCTGCCATTAGCGGCCTGGGCGGAAGTTCCTGTGTATGACGGCGTTGCCG CCAACAATGGCGGCAACGTTCCTCCTTCCGGGTATGGCACGGCAGGTGCCGGCGGCGCCTTTGCCGGAGGTGGGGTGACAACCCCCACCTCCGTGCAGGG CGAACTGTTCATGCAGCTCCAGCAGATGCAGGACGAGTTGGCTCGCCTGCGTGGCACGCTCGAGGAGCAGCAGAACCAGATCCAGCAGCTCAAGCAGGAA AGCCTGGAACGCTACCAGGACCTCGACCGTCGGATTGCCGGTGGTGGCGCTCCCGCTGCACAGAATTCCGCACCCGCTGGCGCCATCAACGCCAATGGGG CGCCTGCGGCTCCCGCAGGCAACAACGCACCGGCGCCGAGCAGCGAGCCGGGCGACCCGGCGAAGGAGAAGCTCTACTACGATGCGGCCTTCGACCTGAT
|
|
Amino Acid Sequence |
>peptidoglycan-associated lipoprotein
MEMLKFGKFAALALAMAVAVGCSSKGGDASGEGANGGVDPNAGYGANSGAVDGSLSDEAALRAITTFYFEYDSSDLKPEAMRALDVHAKDLKGSGQRVVL EGHTDERGTREYNMALGERRAKAVQRYLVLQGVSPAQLELVSYGKERPVATGHDEQSWAQNRRVELKK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|