Pseudomonas aeruginosa LES400, T222_RS46430
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa LES400 sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GACCTTGCGCAAGCTCTGCTGGGATGCCGCCGAACTCGCAGGGCTCGTTGCCGGGGTTCATTGCTGGTGGGTCGAAGGGCGCGAGGCGGAGGCGCGGCAG TTCCAGGCGCAGATGTCTTTCACCTTGGCGCGAGAAACCTTCTGCCAGGCCGAGCACGACACGATCATGCAGGACGAGCGCCTGTTGCAGGAGCTTGACG AGGCTAGCGAGCGGTCTTTGAAGCAACGTACGTAGCGCGTCGACAAACGAGGGCCGGGCCGGGTTTTACCTACAGGTAAACCCGGCCCGGGTATGTCCGG GGTAACGAAATACGACAGTTGAGTTTTTTTCCGGTTTTTCCTGCTGAGACGTCTTTGTAATTGATAAGTATTCTTAAATATTTATCCATACGAAATATAT GGAGAAAAACATGCCAACAGCACATATGGAGAAAAACATGCCAACAGCACATGCGGTTTCCCCTCTGGCAAGGGCTTTAGGAAGTTTGGGGGCAAACAAG
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| DNA Sequence for Gene |
>T222_RS46430
ATGTCCAGGCTTGGCCTGGCCCTTCTGCTGGTGAGCGCCCAGGCGGTCGCGCAGGAGTACGAATTCAACGTTCCCGCCCAGCGGCTCGACGCGGCGCTTC AGGCGCTTGGCCGCCAGGCGGGTCTGCAGGTGCTCTACAACCCGAGCGACCTGAGTGGTCTGCGTAGCCGCAGTGTCAGCGGCAAACTCGAATTGGAACA GGCGATCAGCCAACTGCTGGATGGGGCCAACGGTATCGGTTTCGAACTGCAGGGCAAAACCCTGATCCTGCGCCTGCAGGACTCCTCTTCGGTGATATCC CTGGATTCAATGGTGGTTTCAGGCCTGGCGCTGAATCCCACTACTGAGAACAGCGGCTCCTATGCCTCGCCTGCGGTGTCGATCGGCAAGGGCAACAAGA GCATCAAGGAAATTCCCCAATCGGTGACGGTGGTCACCCAGAAACGGATGCAGGACCAGAACATGTCCACCGTATCCGATGTCCTGGCCAACGCGCCGGG CGTTACCTCCATCCCGATGTTCGGTACCGGCGAGCAGTACTACTCTCGCGGTTTCTTCATCGAAAACTTCCAGTACGACGGTGTACCCCTGGAGCGCCAA TCCTATGCCCGTGGTTCGGACTTCAGCGGGCAGACCGCGATCTTCGATCGGGTAGAGATTCTCCGGGGTGCGCAAGGTCTGCTGGAGGGCGGCGGCAATC CCTCGGGCTCGGTCAACTTCGTGCGCAAGCGACCGACGGCGGAGAACCAGGTCCGGCTGACTGCCAAGGCCGGCTCCTGGGATCACTATGGTACCCAGGC CGATATCTCCGGCCCGATCGACGAACAGGGAAGACTGCGAGGGCGCCTAGTTCTCGACTACGACACCAAGAACTCGTTCGTCGACCACGTAGGCGATGAC CGCCAGACCATCTATGCCGCGCTCGATTACGATCTTACGGAAGCTACACGCCTCGGCTTCGGCTTCAGTCGCGAGCGGATCGACGCCAACATCGATGTCA ACGGCTTGCCCAACTATACCGATGGTTCGATGCCGCATTTCAGTCGCTCGACTTTCCTCGGCGGCGACTGGTCCTACTGGGACAAGATCCAAGAGACCTT CTACTTCGATATTGCCCACCAGTTCAACGAAGACTGGTCGTTGAATGCCACGGTGGTCAATGCGCGCGAGAAGAACGACTACAAGTACCTGCTGATGGCC GGCAGCATCAATCCGGACAATACCAGTACGCTGCGGGGAGATGCCTACGTCTTCGACTTCTTTTCCGAGCACTGGGGCGGGGATGTCTATGTCAATGGTC GTACCAAGGTTGCCGATCGCCAGCTGAACCTTACATTCGGGGCGAACTATTCGGACCTGGACAGCAGCGATACCTTCGGCTGGAGGCAGCGCTACGTACC CAACTGGGATATCTTCAACTCGCCGGTCAATACCAACAAACCATCCGATGACGACATCTATTCCGCCAGGCGCAGCGACGATGGCTACGCTTCGATCCAG AAAGGCGTCTACGGCATGGGGCAATACTATCTGACCGACGACCTGTCCGTAGTGCTCGGGACTCGCATTTCGTCCTACCAGAAGGCTTATACCTCCAATG GGCCTTGGGGTTATTCGAAGGCGGTGGCCAAGGAGTCGGCGAAGGCCATTCCCTATGCCGGCATCATCTACGACCTCAATCCGGAGTGGAGTGCGTATGC CAGCTTCACCAAGATCTTCCTTCCGCAGTCGGTGCGTACCGCGAGCGGCAGCATCCTGGGACCGAAAAGCGGGAAAAGCGTCGAGACCGGTCTGAAAGGC ATCCTCAACGATGGCCGCTTGAATGCCACCTTCGCGCTGTTCCGCATGGAACAGGACAACATCCCGATCCAGGACGCCAACCTGCACGATGACGTTCAGG AAGCCAACTGCGGCGGTACCTGCTACCACGGCGGCGGCAAGGCTATCAGCCGCGGCTTCGAGACCGAGCTCAGCGGCGAGTTGTTCGACAACGTGCAGGT ATATGCCGCCTACACCCTCAACCTGCTGCGTTACCAGGGCGAGGTGCCCAGCGAAGCGGATGACGTTGGCGCCAGCGTCAATACACCGAAGCACATATTC CGCTCCTGGGTCGACTACCGGTTGCCGGGCAATTGGTCGCGGGTATCCGTCGGCGGCGGCGTCAATGCACAGAGCCGGTCGGCCGGGTTCGGCTACTACG GACGGGAGCAGAGCGGCTTCGCGGTATGGAACAGTCGCCTGGCTTATCGCTTCACCGAAGAGCTGACCGGTGCGATGAACGTCAACAACATTTTCGACAG GCGCTACTTCAAGTCCGTCGACTATGGCCACAACTACTTCGGCGATCCGCGCAACGTGCTGTTCACGCTTACCTATAGCTACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCTGCTGACGGCCGGTCATCGGGCCTGCCGGAACGGGAACTGTACGAATGCCGGCCTTCGGGCCGGCTTTTTTCTATCCGTTCGGAATCCGGGTGACGGC CAGCAGGGTTGTTGGCGATTCTCGTCGGCTGGTCCGTGACGAGCACGACGGTGCGTCATTGCCGGCAGTGCAGGCACAAAGATAGAGGCGCGCAGCTAAT GTTGGGCGACTGGGCGACTGGGCGACTGGGCGGCGGCGATGTCTTCAGCACGCTTCGCAGTAGAAGAGAGGGAGTCGAGAGACGCAGAGACGGGCTGGCT GAGCGGGCGATACGACGTGTGGAAAGGCGGTTTGTCGGGGTGAGCTTCGCTGCTGCCTCACCGCGAGGCGGGAAGGGCGGACGGGACGCCATGGTGTCCC GTCAGGCTGATGTCTATCAGGCGGGGTGCAGCGCGGGTTCCACAATCTGGCCGGCGTGCATATGTACCAATTTGTCGGCGATGTCGAAGTAACGGTCGTC
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| Amino Acid Sequence |
>protein FpvAIII
MSRLGLALLLVSAQAVAQEYEFNVPAQRLDAALQALGRQAGLQVLYNPSDLSGLRSRSVSGKLELEQAISQLLDGANGIGFELQGKTLILRLQDSSSVIS LDSMVVSGLALNPTTENSGSYASPAVSIGKGNKSIKEIPQSVTVVTQKRMQDQNMSTVSDVLANAPGVTSIPMFGTGEQYYSRGFFIENFQYDGVPLERQ SYARGSDFSGQTAIFDRVEILRGAQGLLEGGGNPSGSVNFVRKRPTAENQVRLTAKAGSWDHYGTQADISGPIDEQGRLRGRLVLDYDTKNSFVDHVGDD RQTIYAALDYDLTEATRLGFGFSRERIDANIDVNGLPNYTDGSMPHFSRSTFLGGDWSYWDKIQETFYFDIAHQFNEDWSLNATVVNAREKNDYKYLLMA GSINPDNTSTLRGDAYVFDFFSEHWGGDVYVNGRTKVADRQLNLTFGANYSDLDSSDTFGWRQRYVPNWDIFNSPVNTNKPSDDDIYSARRSDDGYASIQ KGVYGMGQYYLTDDLSVVLGTRISSYQKAYTSNGPWGYSKAVAKESAKAIPYAGIIYDLNPEWSAYASFTKIFLPQSVRTASGSILGPKSGKSVETGLKG ILNDGRLNATFALFRMEQDNIPIQDANLHDDVQEANCGGTCYHGGGKAISRGFETELSGELFDNVQVYAAYTLNLLRYQGEVPSEADDVGASVNTPKHIF RSWVDYRLPGNWSRVSVGGGVNAQSRSAGFGYYGREQSGFAVWNSRLAYRFTEELTGAMNVNNIFDRRYFKSVDYGHNYFGDPRNVLFTLTYSY
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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