Strain | Pseudomonas aeruginosa LES400 sequence. [Details] | |
DNA Sequence Upstream of Gene |
ATACCGCGCCGGCGCCACGGTTCTGGTTGAAGGCGTTGACCCGGAAACGCGCGACGCCCGGCACCTCGAAGGAGAAGTCGGTCTCGAGGAATTCCTCGAA GTCCTTGCGCTGCTTGTCGTTCATGATGTCGTAGATCAGCGCATGCACCTGCTTGTGTTCCAGCGGTGGCAGGTTGATCCGGCGTACATCGCCATCCACC CGGATCATGGGCGGCAGGCCGGCGGAGAGGTGCAGGTCCGAAGCGCCCTGTTTGGCACTGAAGGCGAGCAGCTCGGTAATATCCATGGGACTCCCCAATT ACAAGCAAGCAGGTAGAATGCCGCCAAAGCCGCCGTCTCGGACAAGGAAAACACCGGATGAACCAGGGTGCTTCCAGGACACGCGTGGTGTCCTGCGCCA GACGCGGAACCTCGACACTGGAACAGGAAGATGGCCATCGAGGCCGGCGGTTTCGAGGGCGTCGAGCCGACGCCGACCGCACTTCCATAGGGCGCAGGTA
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DNA Sequence for Gene |
>T222_RS33595
ATGTCCACGATAGCAGAGAATATTGCAAAGGTTGCCGCGCGCATCCGTGAGGCAGCGCAAGCTGCGGGGCGCGATCCGGCCACGGTCGGCCTGCTCGCCG TGAGTAAGACCAAGCCCGCCGCCGCGGTGCGCGAGGCGCACGCCGCCGGCCTTCGCGACTTCGGCGAAAACTACCTGCAGGAGGCCCTCGGCAAGCAGGC CGAACTGGCCGACCTGCCCTTGAACTGGCACTTCATCGGCCCCATCCAGTCGAACAAGACGCGGCCCATCGCCGAGCATTTCCAGTGGGTGCACTCGGTG GACCGGTTGAAGATCGCGCAGCGCCTGTCGGAGCAACGCCCGGCCGGGCTGCCGCCCCTGAATGTCTGCCTGCAGGTCAACGTCAGCGGCGAAGCCAGCA AGTCCGGCTGCGCCCCCGAGGACCTGCCGGCCCTGGCCGAGGCCGTGAAGCAACTGCCCAACCTCCGATTGCGTGGCCTGATGGCCATCCCCGAACCCAC CGCCGAACGCGCCGCGCAACACGCCGCGTTCGCCCGCCTGCGCGAACTGCTGCTGGACCTGAACCTTGGCCTGGACACCCTGTCCATGGGCATGAGCGAC GACCTCGAGGCAGCCATCGGCGAAGGTGCGACCTGGGTCCGCATCGGTACCGCCCTGTTCGGCGCCCGCGACTACGGCGCGCCGGCTTCTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AGGAATCCCCTATGAGCACACCCCGCATAGCGTTCATCGGCGCCGGCAACATGGCCGCCAGCCTGATCGGCGGCCTGCGCGCCCAAGGCGTGCCGGCGGC GCAGATCCGCGCCAGCGACCCGGGCGCCGAGCAACGCGCGAAGATCGCCGGCGAGTTCGCCATCGACGTGGTCGAGTCCAACGCCGAGGCCGTGGCCGAC GCCGACGTCGTGGTCCTGTCGGTCAAGCCGCAGGCCATGAAAGCCGTGTGCCAGGCCTTGGCGCCGGCGCTGAAGCCGGAGCAACTGATCGTCTCCATCG CCGCCGGCATCCCCTGCGCCAGCCTCGAAGCCTGGCTCGGCCAGCCGCGCCCGGTGGTCCGCTGCATGCCCAACACCCCGGCGCTGCTGCGCCAGGGCGC CAGCGGGCTGTACGCCAACGCGCAGGTCAGCGCCGCGCAACGCGAGCAGGCCGGGCAGTTGCTGTCCGCGGTGGGCATCGCCCTGTGGCTGGACGACGAA
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Amino Acid Sequence |
>YggS family pyridoxal phosphate enzyme
MSTIAENIAKVAARIREAAQAAGRDPATVGLLAVSKTKPAAAVREAHAAGLRDFGENYLQEALGKQAELADLPLNWHFIGPIQSNKTRPIAEHFQWVHSV DRLKIAQRLSEQRPAGLPPLNVCLQVNVSGEASKSGCAPEDLPALAEAVKQLPNLRLRGLMAIPEPTAERAAQHAAFARLRELLLDLNLGLDTLSMGMSD DLEAAIGEGATWVRIGTALFGARDYGAPAS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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