Strain | Pseudomonas aeruginosa LESlike7 sequence. [Details] | |
DNA Sequence Upstream of Gene |
TTCGGCCTCGCCGTCGAGGACGTGGTCGCCATGGGCCGCACGCCGCACAAGGGCCTGTTCGACGGCCACGGCGCGGACGACCGCCAGCGGGTCCGCCAGG CGCTGCTCCAGGTCGGTCTCGAAGGGCGTGCCGCGAGCCCCTTCGCCAGCCTCTCCGGTGGCGAGAAGCAGCGCGCCCTGCTGGCTCGCGCGCTGGTTCA GGAGCCGCGCCTGCTGATCCTCGACGAACCGACCAACCACCTCGACCCGCGCTACCAGCTGGAGCTTCTGCGCCTGCTGCGCAGCCTCGGCCTGAGCACC CTGGCGAGCTTCCACGACCTCAACCTGGCGGCGGCCTTCTGCGACCGCCTCTACGTGCTCGACGGCGGCCGCATCGTCGCCCAGGGCACGCCGACCGAAG TGCTCGACGCCGACCTGCTGTGGCGGGTGTTCGGCGTCCGCGCCCTGGTCGACCGCCACCCCCTCGCCGACCACCCGCGCCTGACCTGGATTACCCAAGC
|
|
DNA Sequence for Gene |
>T228_RS41340
ATGAAGCACCCGATCCTGCACCACCTGCTGCTCTGCGCCCTGCTCGCCTGCGCCGATGCCGCGCTGGCCGAGCGCTACCCGCTCAGCGTGCGCAGCTGCG AGCGCGAAGTGACGTTCGAGCGCGCGCCGTCGCGCGCGGTCAGCCACGACATCAACCTCACCGAGATGATGGTCGCCCTCGGTCTGCAGACGCGCATGGT CGGCTATACCGGCATCAGCGGCTGGTGGAAGAATGCCGATCCCGGATTGATCGCCGCGCTCAAGCCGCTGCCCGAGCTGGTGGCGCGCTACCCCACGGCG GAAACCCTGCTCGATGTCGACGCCGACTTCTTCTTCGCCGGTTGGGGCTACGGCATGCGCGTCGGCGGCGACCTCACTCCGGCCAGCCTGGAGCCGCTGG GGGTGAAGGTCTACGAGCTGAGCGAATCCTGCGCGCAGATCGGCGAGCCGCGCCGCGCCAGCCTCGACGAGCTGTACCGCGACCTGCGCAACCTGGGACG GATCTTCGACGTCGAACCGCGCGCCGAGCGCCTGGTCGCCAGCCTCCAGGCACGCATCGAGCGCGCCCGCGCCGGCATCCCGGCGAACACCGAGGCGCCG CGGGTGTTCCTCTACGACAGCGGCGAGGACCGCCCCTTCACCTCTGGCCGCCTGGGCATGCCGCAGGCGCTGATCGAGGCCGCCGGCGGCCGCAGCGTGA CCGACGACGTGGCGGCCAGTTGGACCCAGGTCAACTGGGAAAGCGTGGTCGCCCGCGATCCGCAGGTCATCGTCATCGTCGACTACGGCGAGACCAGCGC CGCGCAGAAGCAGCGCTTCCTCGAAGAGAACCCGGCGCTGCGCAGCCTGACCGCGATCCGCGAGCGACGCTTCATCGTCCTGCCCTATAACCAGGCCACG CCGGGCATCGGCAACGCCGCGGCGATAGAAACCCTGGTCGCCGGCCTCCACCCTCGGGCGCCACGTCCATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
CCCTGTTCCGCAGCCCTCGCGCCTATTGCCTGTTGCTGGGCAGCCTGGTCATGTTGCTCGGCCTGTCCTGCGTGGTCGCCCTCGGCTTCGGTCCGGCGCG ACTGGACAGCGGCCTGGTCGGCCGCATCGTCCTCCAGCGCCTGTTCGGCGTAGCGGCGGAGCCCGGTGCCTGGAGCGCCGGCCAGGAGCACATCGTCTGG CTGATCCGCGCCCCACGGGTACTGCTCGGTGCCTGCGTCGGCGCCGGCCTGGCGCTGGTGGGAGCGGCCCTGCAGGCGGTCACGCGCAATCCGCTGGCCG ATCCGCACCTGCTCGGCGCCACCTCCGGCGCGACCCTCGGCGCGGTGTTGGTGGTGCTCTACATCGGCGAGGTGATCGGCCTGCTGACCCTGCCGCTGGC GGCCTTCCTCGGCGCCCTCGGCAGCATGCTGCTGGTGCTCGGCGTGGCCAGTCGCGGCGGCCGCCTGGGCAGCGACCGGCTGTTGCTGGCGGGGGTCGCG
|
|
Amino Acid Sequence |
>iron ABC transporter substrate-binding protein
MKHPILHHLLLCALLACADAALAERYPLSVRSCEREVTFERAPSRAVSHDINLTEMMVALGLQTRMVGYTGISGWWKNADPGLIAALKPLPELVARYPTA ETLLDVDADFFFAGWGYGMRVGGDLTPASLEPLGVKVYELSESCAQIGEPRRASLDELYRDLRNLGRIFDVEPRAERLVASLQARIERARAGIPANTEAP RVFLYDSGEDRPFTSGRLGMPQALIEAAGGRSVTDDVAASWTQVNWESVVARDPQVIVIVDYGETSAAQKQRFLEENPALRSLTAIRERRFIVLPYNQAT PGIGNAAAIETLVAGLHPRAPRP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|