Strain | Pseudomonas aeruginosa LESlike5 sequence. [Details] | |
DNA Sequence Upstream of Gene |
GAGACGGGTCTTGGTGTCGGCGAGCTTGATGTCGCGGGCCAGTTCGGGGGTCAGCTTGCCCTGTTCCTCGATGCTGGCGAGGATCGCGCCGCGGCGTTCT TCCAGTTCGCGTAGATAGCGCAGGCGCTCTTCCAGCATGCGCAACTGGGTATCGTCGAGGCTGCCGGTGACCTCTTTGCGGTAACGGGCGATGAAGGGAA CGGTGGAGCCTTCGTCGAGCAGGGCGACGGCAGCGGCGACTTGCTGCGGTTGAACGCGGCCGGAGGGCAGTGCGGAGAGCTCTTCGGCGATACGGGTGTT GATGCTGTCCATTGATCCACCTGGTAAAACGAACGAAAACGGGCCGTGTAGACAACGCCCCGCCGCAAAAGCGCCGCATTATACCTGCCAAGTTTCGCCT TGGAGGGCGGCTGGTCGGGGAAAAATCTGCTAACAATGGACAGTCCGGCCCAGCCGCTACCTGGGCGATAATGCCCGCCTGACTCATTCTGGGAGTTTCT
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DNA Sequence for Gene |
>T227_RS59220
ATGTCGAACCCTGCCGCCCTGGCCGAAGGTGAAAAGATCCTCGTCGTCGACGACGACGCCCGCCTGCGCCGCCTGCTCGAACGTTTCCTCGACGAGCAGG GCTACCGCGTCCGCGCGGTGGAGAACACCGAGCAGATGGATCGCCTTCTATCCCGCGAACTGTTCCAGCTGGTTGTGCTCGACCTGATGCTTCCCGGCGA GGACGGCCTCACTGCCTGCCGCCGCCTGCGCGAACAGAACAACCAGGTGCCGATCATCATGCTCACCGCCAAGGGCGACGAGGGCAGCCGCATCCAGGGC CTGGAACTGGGCGCCGACGACTACCTGGCCAAGCCGTTCAACCCGCGCGAACTGCTGGCGCGGATCAAGGCCGTGCTGCGCCGCCAGGCGCCGCTGGTGC CCGGCGCGCCTGCCGGTGCCGACGAGGTGGTGACCTTCGGCGACTACCAGCTGTTCCTCGCCACCCGCGAACTGAAGAAGGGCGACGAGGTACACATGCT GACCACCGGCGAGTTCGCCGTGCTCAAGGCCCTGGTGCAGCACGCCCGCGAACCGCTGACCCGGGACAAGCTGATGAACCTCGCCCGTGGCCGCGAGTGG GATGCCCTGGAGCGTTCCATCGACGTGCAGATCTCGCGCCTGCGCCGGCTGATCGAGCCGGATCCGTCCAAGCCGCGCTATATCCAGACGGTCTGGGGCG TCGGCTACGTGTTCGTGCCGGACGGCAACGCGCGCAAGGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GTCTCCGCGCGGCCGGTGCAGCGATGCACCGGCCGCGTCGTCTTACCCGCAACAGGCGTCGGCCCCGTCCGCCGGCGCGCAACCGGTCCGATCGATGAAA ACGCCGCTCTGGTTCCCGCAAAGCTTCTTCGCCCGCACCCTCTGGCTGGTGCTGATCGTCGTGCTGTTCTCCAAGGCGCTGACCCTGGTCTACCTGCTGA TGAACGAGGACGTGATCGTCGACCGCCAGTACAGCCACGGCGCGGCGCTGACCATCCGCGCGTTCTGGGCTGCCGACGAGGAGTCGCGCGCGGCCATCGC CAAGGCTTCCGGCCTGCGCTGGGTGCCGAGCAGCGCCGACCAGCCCGGCGAGCAGCACTGGCCGTACACGGAAATCTTCCAGCGGCAGATGCAGATGGAG CTGGGGCCGGACACCGAGACCCGCCTGCGTATCCACCAGCCGTCGCAGCTCTGGGGGCGCGCACCGAGCCTCGGCGAAGGCTGGCTGGCGGTGCCGTTGT
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Amino Acid Sequence |
>two-component system response regulator
MSNPAALAEGEKILVVDDDARLRRLLERFLDEQGYRVRAVENTEQMDRLLSRELFQLVVLDLMLPGEDGLTACRRLREQNNQVPIIMLTAKGDEGSRIQG LELGADDYLAKPFNPRELLARIKAVLRRQAPLVPGAPAGADEVVTFGDYQLFLATRELKKGDEVHMLTTGEFAVLKALVQHAREPLTRDKLMNLARGREW DALERSIDVQISRLRRLIEPDPSKPRYIQTVWGVGYVFVPDGNARKA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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