Pseudomonas aeruginosa LESlike5, T227_RS43255
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa LESlike5 sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCCGTGTGATCCTGTTTGGGTGAGCTAAGGCTTGCTGGATGGGCGCGGGCAGGCCGGGTGATCCTGGTCGGATCACCTCGCACCTCAAGGGTGACTGCGT AGTGGCGGGAGGCTCGATTGCCAATAGGAGCTAGCTGACCTGCCCCCCCGATTTCAGTACCACGTCAAACTTAGTAGAGTCCGTTTTCCGAGCAGGAGAC GGCAGTGAAAAAGCGTTTTACCGAAGAGCAGATTCTCGACCTCCTCAAGCAGGCGGAGGCCGGTGTGCCGGTGAAGGAACTGTGTCGCCGACACGGCTTC AGTGATGCCTCGTTCTACACCTGGCGGGCCAAGTTTGGCGGTATGACCGTGGCGGACGCCAAACGGTTGAAGGATCTTGAACTGGAAAACAGCCGATTGA AGAAGTTGCTCGCCGAGGCCCACCTCGACATCGAGTCGCTGAAAGTGGTCGCCCGGGGAAAAGGGTAAGCCCGACAGCACGGCGGGAGGCGGTGCAGGAG
|
|
| DNA Sequence for Gene |
>T227_RS43255
ATGCAGGCGCGAACTGGCATCTCCGAGCGTCGTGCCTGTCAGTTGATCGGGCTGTCCCGCTCGGTGTTGCGCTACCAGCCGCGAGCCAGTGTGCAAAACA CCGAGCTGCAAGCCCAACTGGTGGAACTGGCCCAAGAGCGCCGGCGCTTTGGCTATCGCCGCCTGCACATCCTGCTGCGGCGTGCTGGCGTGCAGGTCAA CCACAAGCGGATCTATCGCCTGTACCGCGCTGCCGGCTTGATGGTGAAACGGCGGCGCCGCCGCCATGGCGTCGCGGTGGAGCGCGAACGTCTGAGTTTG CCGAGCGCACCAAACCAGGTCTGGTCGATGGACTTCGTCTTCGATGCACTGAGCACCGGGCGGCGGATCAAATGCCTGACGGTGGTCGATGACTTCACCA AGGAGTCGGTCGGCATCCTGGTGGAGCACGGTATCAGCGGCTTTCGTGTCACACGGGCGCTGGACGAGATGGCGCGGTTTCGCGGCTACCCGAAAGCGAT CCGCACCGACCAGGGGCCCGAGTTCACCGGCAAGGCACTCGATCAATGGGCCTATCAGCGCGACATCAAGCTGAAGCTGATTCAGCCTGGTAAGCCCACG CAGAATGCCTTCATCGAGTCGTTCAACGGTAAGTTCCGGGACGAATGCCTCAATGAGCACTGGTTCTGTTCGCTGGCCGAAGCGAGAATCCGCATCGCGG CCTGGCGGCGGGATTACAACGAACACCGACCGCACAGCGCGATTGGCAATCTCACCCCGGCAGAATTTGCTGCAAGTTGGCGAACTCGCCAGCAGCAACT GAAGCAGGAAAAATTAATATCAACCCCAGGGCCTACTAACTAG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCAGCGGTACTAAAACTGGGGGCAGGTCACCAATCGCTTAACGGTCGGTTTCAGTCAACCCAGCGCAACTCCAATGGATGCTATGATGCATGCAATAGCT AAGCCTGTGGCTAGGATGAGTGCGGCGTTGGCCAGGCGCTTACCAACGATTCCGGCATCAGTTGCGTTCATTTTCCCATCTACCTTGACCCGATGCTTGG GTCTATAATTGAACAATGTTCTGCTCCTTGTCCTTCCCAAGGGGTGGAAACAAAAACCCCCGAAGCCGGCCAGCTCTCGGGGGTTTTGCTTTTTTGGCCG GTGAAGAAAGTTTGACCAAACGGTTTTTCGATTGCCGCAAGAAATACCCGGTAGGTGCCCGGAGTATTTTTTTTCGTCACCAAAGAAATGCCGGGAGGGC TACCGTGGATTTTCCGATTGACTTTGCCGACCCGCGTCGTTCGGCAATTCGCGATACCGCAGCACCAGTCGCATCCGGTCGAGCCACGGCCCGCCGAACA
|
|
| Amino Acid Sequence |
>transposase
MQARTGISERRACQLIGLSRSVLRYQPRASVQNTELQAQLVELAQERRRFGYRRLHILLRRAGVQVNHKRIYRLYRAAGLMVKRRRRRHGVAVERERLSL PSAPNQVWSMDFVFDALSTGRRIKCLTVVDDFTKESVGILVEHGISGFRVTRALDEMARFRGYPKAIRTDQGPEFTGKALDQWAYQRDIKLKLIQPGKPT QNAFIESFNGKFRDECLNEHWFCSLAEARIRIAAWRRDYNEHRPHSAIGNLTPAEFAASWRTRQQQLKQEKLISTPGPTN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|