Strain | Pseudomonas aeruginosa 2192 supercont1.1 genomic scaffold, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGGTGGTCATCACCAAGGTCTTCGACAAGGCCTCGCCGCTGCTGCTGGCCGCCCTGACCTCCGGCGAGCGCCTGACCAAGGTCGAGATCCAGTGGTACCG CACCTCCGCCGCCGGCACCCAGGAGCACTACTACACCACCGTCCTGGAAGACGCGATCATCGTCGACATCAAGGACTACATGCACAACTGCCAGGACCCG GGCAACGCCCACTTCACCCACCTGGAAGACGTGCACTTCACCTACCGCAAGATCACCTGGACCCACGAAGTCTCCGGCACCTCCGGCTCCGACGACTGGC GCTCGCCGGTCGCAGGGTGAGTTGACAGGCACACCGGTCGTACACCTGTGCGGCCGGTTCTCCGTCGAGCCGAAAATGTCCGCGACTTCGCGAAATCGAC ACAGAGCCAAAGACTTTCGGCGCCGGCTGAGCAAGAGTAACGTGGCTTGCTCCTCCAATGGATTGGAAAGGAACTGCCCACCCGGAACAGGGAACGATCC
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DNA Sequence for Gene |
>PA2G_04173
ATGCGTCAAAGAGACCTGAAATTCACCTTCGTCGTTGGCGAAGGGAACCTTGCGTTCGATGTCGTCGAGTTCGAACTGGAAGAAGCGCTCTGCGAGCCTT TCCGCCTGAGCCTGAAGCTGGCCAGCGACAAGAACGCCATCGATTTCAAGCAGGTACTCGACCAGCCGGGCACCTTCACCCTCTGGCAGGACGGCCGTCC GGCCCGCTACGTCCATGGCATCGTCAGCCACTTCACCCAAGGCAGCTCGGGTTTTCGCCGGACCCGCTACGAACTGCTGCTGGAACCACAGTTGGCGCGC CTGGAGCTGTGCTGCAACTGGCGGATCTTCCAGGAGAAGAGTGTTCCGGAGATTCTCCAGGCGCTGCTCAAGGAACACCGGGTGCTCGACTACGAACAGC GCATCTACCATGAGCACCTGCCGCGCGAATACTGCGTGCAGGCCGGCGACAGCGATCACTACCTGCACGACCGGCTGGCCTTCGAGGAAGGCCTGGTCTA CTACTTCCGCTTCGACGAACACCGCCACACCCTGGTCTGCAGCGACCGGCTCTACGTCCAGGAGCGTATCGCCGGCGGCCCGGTGCTGTTCAGCGCCCAG CCGGAGGGCGACAACCCGCAGCCGGTGCTTCATTCTTTCCGCTACAGCGAAAATGTTCGTACGGCTCGACAGACCCAGCGGGACTACAGCTTCAAGCGCC CGACCTACGACCAGGAGCATCATCTCGCTGGCGAGGCGCTCGAGCATCAGGACTCGTCCTACGAGCGCTACGACTACCCCGGTCGCTACAAGCGGAGCGG CGCGGGCCGGCCTTTCAGCGAAAGCCGCCTCAGAGGACATCGGCGCGATGCACGGGTGGCATCGGTCAGCGGCGACGACCCGCGGCTGATCCCGGGCCAC GCCTTTGCCCTGGAAGGTCATCCGCGTGCCGACTTCAACGCCTGGTGGCGGCCGGTGCGGGTGGTCCATCGCGGCACCCAGTATGCCGGCCAGGAGGAAG AGTCCGCCGACGCCCCTCTGGGGGTGAGCTACGACCTGCGCGCCGAACTGGTACCCGAGGACGTCGAATGGCGTCCCGCACCGCTGCCTCGGCCGCGTAT CGATGGTCCGCAGATCGCGACGGTAGTCGGCCCGGCAGGGGAAGAGATCCATTGCGACGAGTGGGGACGGGTGAAAGTCCAGTTCCCCTGGGATCGCGAG GGACGTCACGATGAATTCAGTACCTGCTGGATACGGGTCGCGCAGAACTGGGCGGGTGCCGACTGGGGGCACATGGCGATCCCGCGGATTGGCCAGGAGG TGATCGTCGATTACCTGGACGGCGACTGCGACCAGCCGATCGTCACCGGGCGTACCTACCGGGCGACCAACCGGCCGCCCTACGCGCTGCCCGACCACAA GATCCTCAGCACCATCAAGAGCAAGGAGTACAAGGGCAGCCGGGCCAACGAGCTGCGCATCGACGACACCACGGCGCAGATCAGTGCGGCGCTGATGAGC GACCACGGTGCCAGCGCGCTGCACCTGGGCTACCTGACCCATCCTCGGCCCGAAGGCGGCAAGCCGCGCGGCGAGGGCTTCGAACTGCGCACCGACGAAC ATGGCGCGGTGCGTGCGGCCAAGGGGCTGCTGCTGAGCACCGAGGAGCAGCTCAGGGCCGGCGCCGGCCATCTCGACCGAGGCGTCGTGGTGCAGGTGCT GGAGGCGGCGCTGGAGCTGGCCCGCGAGCTGGGCGACTACGCCGGGGAGCACCAGGGCGTGGGGCACGACGCGGCGCCGCAGCAAACCCTCCAGGAAGCC GTGCGCGACCTCGGCCACGGTGCCAACGACGAGTCCGGCAAGAGCAACGGAGGCAAGCCGGCGATCGCCTTGAGCGGTCCGGCAGGGATCGCCGCGGCGA CGCCGGCGAGCCTGACCCTGGCCGCCGGCGAGCACGTCGACAGCGTGGCCCGGCAGAACCAGCAGGTGACCGCCGGGCAGAAGGTGGTGATCAACGCCGG CAGCGACATCGGCCTGTTCGCCCAGGGCGGCGAGCTGCGCCAGATCACCCACCAGGGGCCGATGCTGCTGCAGGCGCAGAAGAACGACATCCGCCTGGAA GCCGAGCAGAGCGTGGAGGTCAGCGCCAGCCAGCAGCACGTGCTGGTCACCGCGAAGGAGCACATCACCCTGATGTGCGGCGGCGCCTACCTGACCCTCA AGGGCGGCAACATCGAGCTGGGCATGCCCGGCAACTTCGTGGTCAAGGCGGCGAAGCACAGTCATGTCGGCGCGGCCAGCCTGGAAGCCGAGCTGCCGCA GTTCGAGGTGGGCGAGACGCAGCGGCGGTTCGTCCTCAAGCAACTGGACGGGCAGACGGCCATGCCCAACGTGCCCTATACCATCACCATGGCCAACGGC GAGGTCATCGAGGGCGTCACCGACGCCGAAGGCGCTACCCAGCTGCTGCAGAAGGATGCGATGAACATCGCCAAGGTCGATATGAAACACACGAAATCGC CCGCCTCCGCAGTTGCCGGGATAGCAGCGGCGGTTGGCGCGGCGGTTGCAGTCGGCAAGCTCCTGAGTGGCCCCGACGCCGAGGCCGGACGTGCTCTCAG CGAAGGGGAAATCAGCCTGGCGAAAGGCGTATTCGGCGATTCCATCGACTATTCCACGGTCCGCCTGCGCGACGAGGACTATGTCCCCTGGCAGGGCAAG GACTACGTGATGGCGCCGAACGGCCACATCTACTTCGGCGAGGAGTTGCGCGGCGTGGCGGACTGGAACCTGGAGAGCCTGCAGCGCCAGGGTCTGTTCA TTCACGAAATGACCCATGTCTGGCAGCACCAGCATGGCGTGAACGTCCTTCTGGTGGGGGCCTACCAGCAAGCCAGGCAGTTTCTCCTAGGCGACCAGTA CGCCTACCGGTTGGAGCCGGGAAAGACGTTGAAGGACTACAACATCGAACAGCAGGGAGACATCGTTCGAGATTATTTCCTCGAGAAGAACGAGTTCGGG GAAGCCTCTGCGAACAGCAGGTTCGCTGGCGTACTGAAAAACTTCCCAACGGGATACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCAATGAAATGCAAGACCTTGCTCATTGCCTGCCTGTTCGGCCTGGGAAGCGCCCAGGCCCTGGCCGTTTCCAAACTGCCACCGCAGATCCCGGTGCACG CCGGCTCCGGGCGCGTGACACTGGATCTACGCCCCTTGCTGGCGGAAACCAACGACGTCGAGATCACCCGTGTTTCGGTATGTCGGCGGGTCGGCAGCCA TTGCCAGGAAACGCTGTGGCGGATCGAGCTCCCGCCCGGGTGGCGTGCCGGGGAGATCGAGGTCTTCGGCGACTATCCCGGCTCCAGCGTGCTCCTGCGC CGGCCGGAGCGCTTGCAGCCAGATGGGAGCTACAACGCATTCATTCATTTCAACGAGCGTAGCCGTCGGCACCGGCAAACGGTTTCCAGCATTGCCGTCG AATTCTGCCTGGCCGGCGAACCTGGCAACTGGATGCTGCTCGACGAAGCGACCTGCCTGGCACGACGCAACGCCGAGGAGCGGCAAGGAGAGAAGCCATG
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Amino Acid Sequence |
>hypothetical protein
MRQRDLKFTFVVGEGNLAFDVVEFELEEALCEPFRLSLKLASDKNAIDFKQVLDQPGTFTLWQDGRPARYVHGIVSHFTQGSSGFRRTRYELLLEPQLAR LELCCNWRIFQEKSVPEILQALLKEHRVLDYEQRIYHEHLPREYCVQAGDSDHYLHDRLAFEEGLVYYFRFDEHRHTLVCSDRLYVQERIAGGPVLFSAQ PEGDNPQPVLHSFRYSENVRTARQTQRDYSFKRPTYDQEHHLAGEALEHQDSSYERYDYPGRYKRSGAGRPFSESRLRGHRRDARVASVSGDDPRLIPGH AFALEGHPRADFNAWWRPVRVVHRGTQYAGQEEESADAPLGVSYDLRAELVPEDVEWRPAPLPRPRIDGPQIATVVGPAGEEIHCDEWGRVKVQFPWDRE GRHDEFSTCWIRVAQNWAGADWGHMAIPRIGQEVIVDYLDGDCDQPIVTGRTYRATNRPPYALPDHKILSTIKSKEYKGSRANELRIDDTTAQISAALMS DHGASALHLGYLTHPRPEGGKPRGEGFELRTDEHGAVRAAKGLLLSTEEQLRAGAGHLDRGVVVQVLEAALELARELGDYAGEHQGVGHDAAPQQTLQEA VRDLGHGANDESGKSNGGKPAIALSGPAGIAAATPASLTLAAGEHVDSVARQNQQVTAGQKVVINAGSDIGLFAQGGELRQITHQGPMLLQAQKNDIRLE AEQSVEVSASQQHVLVTAKEHITLMCGGAYLTLKGGNIELGMPGNFVVKAAKHSHVGAASLEAELPQFEVGETQRRFVLKQLDGQTAMPNVPYTITMANG EVIEGVTDAEGATQLLQKDAMNIAKVDMKHTKSPASAVAGIAAAVGAAVAVGKLLSGPDAEAGRALSEGEISLAKGVFGDSIDYSTVRLRDEDYVPWQGK DYVMAPNGHIYFGEELRGVADWNLESLQRQGLFIHEMTHVWQHQHGVNVLLVGAYQQARQFLLGDQYAYRLEPGKTLKDYNIEQQGDIVRDYFLEKNEFG EASANSRFAGVLKNFPTGY
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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