Strain | Pseudomonas aeruginosa MH27, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCCCCAGGCGCCGAGGGTCGGCGACTCCCAGTTGTCCTCGACGAAGCGGATGTCGTGGACCAGCGGGTCGATGCCGATGGCTTTCAGCGAGCCGAGATAC AGCTCCTGGAAGTTCTCCGGGTTCGGCTTCAGGACCACCTGAAACTGGTAGTAGTGCTGCAGGCGGTTGGGGTTCTCGCCGTAGCGGCCGTCGGTGGGGC GGCGGCTCGGCTGGACGTAGGCGGCGTTCCAGGTCTCCGGGCCAATGGCGCGGAGGAAGGTGGCGGTGTGGAAGGTGCCGGCGCCCACTTCCATGTCGTA GGGCTGCAGCACCACGCAGCCCTGCTCGGCCCAGTAGTTCTGCAGGGCGAGAATCAGGTCTTGGAAGGTGCGCACGGCGGGCGTAGTCTGGCTCACGAAA TTCACCTGTGCTGAGGCTTCGATACAAAACGCGGAAGTATACCCGATTCCCGCGCCGCCTCGCCCGTCCCCCCGATCCCTTCAAAACCACGGAAAGCCTT
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DNA Sequence for Gene |
>PAMH27_RS33005
ATGCCACGCTGCTTCTGGTGCAACGACGATCCTCTCTACATGGCCTACCACGACGAGGAGTGGGGTGTGCCGCAGCGCGATCCCGACGCGCTGTTCGAAC TTCTGCTGCTGGAGGGCTTCCAGGCCGGGTTGTCCTGGATCACCGTGCTGAAGAAGCGCGAGCGCTACCGCGAGGTGCTGTTCGGCTTCGACGTGCAGCG GGTGGCACAGATGAGCGACGCTGAGATCGACGAACTGATGCTCGACCCCGGCATCATTCGCAATCGGGCCAAGCTCAACGCTGCGCGGCAGAACGCCCAG GCCTGGCTGGAGCTGGATGACCCGGCTGGGTTCCTCTGGTCCTTCGTCGGCGGCCAGCCGAAGATCAACCATTTCGCTGGTCGTGCCGAGGTGCCGGCGA TTACCCCGGAAGCCGAGGCCATGAGCAAGGCGCTGCGCAAGGCCGGCTTCAACTTCGTCGGGCCGACCATCTGCTACGCCTTCATGCAGGCCAGCGGCAT GGTCATGGACCATACCCAGGACTGCGACCGTTACGCCCAACTCGTCGGCTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCGGGCGCTCCCTGATGGATGCGTTCGGATGTTCCACGTGGAACATCGGCGCGTAGCATAGCTGGTCGCCCCGCTTCCTTGGCTGCCGCCCTCGCCCTTC TTCCTGGCGTACAATGCGCGTTCGAGTCGAGCGAGGAGTGTTTCGTGGAGAAATTCAAAGGTGCCCTGGTGGTGGGGGCCCTACGCCTGTTCGCGCTATT GCCCTGGCGTGCCGTGCAAGGCGTCGGGGCCGGCATAGGCTGGCTGATGTGGAAATTGCCGAATCGATCCCGCGAGGTAGTGCGGATCAACCTGTCCAAG TGCTTCCCCGAGTTGTCCGAAACCGAACTGGAAAAGCTGGTCGGACAAAGCCTGATGGATATTGGCCGTACCCTCACCGAAAGTGCCTGTGCCTGGATCT GGCCGCCTGAAAAGTCGCTGAGGTACATCCGCGAGGTCGAAGGCATGGAAGTGCTGGAGGAAGCGCTGGCTTCCGGCGATGGCCTGGTCGGCATTACCAG
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Amino Acid Sequence |
>DNA-3-methyladenine glycosidase I
MPRCFWCNDDPLYMAYHDEEWGVPQRDPDALFELLLLEGFQAGLSWITVLKKRERYREVLFGFDVQRVAQMSDAEIDELMLDPGIIRNRAKLNAARQNAQ AWLELDDPAGFLWSFVGGQPKINHFAGRAEVPAITPEAEAMSKALRKAGFNFVGPTICYAFMQASGMVMDHTQDCDRYAQLVG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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