Strain | Pseudomonas aeruginosa MH27, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCACGCCTGCCAGGCCCTGGAACTGATGCCGGCGGAAATCGAACTGTTCGCCCTGCTGGAAGACCTCCAGGCGCGCGGTATCGAGGACGTCCCCGCTCGC CTGGTGGCGGTGGACTACCCCGGCTTCGTCGAACTCGCCACCCGCTTCGACAAGGTCAACAGTTGGCTATGACGCTCCTTACGCTGGAAGGCCGGGAAAT CCGGCTGGACAAGGACGGCTACCTCGCCGCCCTCGACGATTGGTCGGAGCCGGTGGCGGAAGCCCTGGCCGCCCGCGAGGAGCTGGCCCTGACCGCCGAG CACTGGGAGATTCTCCAACTGCTCCGCGAGTTCTATGCGGAGTTCCAGCTGTCTCCGGCCAACCGCCCGCTGATCAAGTACGTCGCCCAGCGACTGGGTC CGGACAAGGGCAACAGCCTGCACCTCAACCACCTGTTCAAGGGCGCCCGGGCCAAGCTTGGCGCGAAGCTGGCCGGCCTGCCGAAACCGAGCAACTGTCT
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DNA Sequence for Gene |
>PAMH27_RS13135
ATGACTATCTCGACTCCCGCCGAACATCCGTTCGCCCAGTTCGTCCGCATCCTCGGCAAAGGCAAGCGCGGAGCGCGCAGCCTGACCCGGGAGGAAGCCC GCGAGGCCCTCGACATGATCCTCGACGGCAGGGTCGAGGACACCCAGCTGGGCGCCTTCCTCATGCTCCTGCGGCACAAGGAGGAAAGCAGCGAGGAACT GGCCGGTTTCACCGAGGCGGTGCGCGAGCGCCTGCAAGTCCCGTCCTTGCGCGTCGACCTCGACTGGCCGAGTTACGCCGGCAAGAAGCGCCACCTGCCC TGGTACCTGCTGGCCGCCAAGTGCCTGGCCGGCCATGGCGTGCGCATCCTCATGCACGGCGGCGGCGCGCATACCGCCGGACGCCTGTACAGCGAACAGT TGCTGGCGGCGCTGGAGATCCCGCTCTGCCACGACTGGCTGCAGGTAGAGCAGGCCCTGGAGCGCGGCCACTTGGCGTTCATTCCGCTCGGTGCCTGGAT GCCGGTGCTGCAACGCATGATCGATCTGCGCAATACCCTCGGCCTGCGCTCGCCGATCCATTCGCTGGTTCGCCTGCTCAACCCCCTGAATGCGGATTGC ATCCTGCAGAGCATCTTCCACCCCGGTTACCAGGAAACCCACCGCGAGGCCAGCCGCCTGCTCGGCGACCGGGCCATCGTCATCAAGGGCGAAGGCGGCG AGGTCGAAGTCAACCCGGACGTCGTCGCCCACCTGTATGGTTGCGACCAGGGCGAAGCCTGGGACGAGGAATGGCCGGCATTGTCGACGCACCGGCACAT GAAGCCGGAACAGCTCGACCCGGGTTTCCTTCGGGCCGTCTGGGACGGCCGCGAAGGCGACGCCTATGGCCACCTGGCGGTGCTCTCCAGCATGGCCCTG GCGCTACGGGCCCTTGGCAAGAATCGCGAAGAAGCCTTCAAGGAAGCCGCACACTACTGGGCGACCCGAAACGAATCGATCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCGATACGAATAGCCCTTTATTTATATAAATTTATCGATCGCCCGACACTAGACTGTTCCTCCAACGACGTATGGAGGAACCCGCTCATGGGACAGTTGA TCGATGGCCGCTGGCACGACCAGTGGTATGACACACAGAAAGACGGCCGCTTCCAGCGCGAAAACGCCCAGCGCCGCCATTGGCTGGGCGAGCCGGCGTT CCCCGCCGAGGGCGGGCGCTACCATCTCTATGTCTCGCTGGCCTGCCCCTGGGCCCATCGGACCCTGATCGTGCGCAAGCTGAAGGGGCTGGAGTCGCTG GTGGATGTTTCGGTGGTCAGTTGGCTGATGCGCGAGAACGGCTGGACCTTCGACCCCGCCCACGGCTCCACTGGCGATCGCCTCGACGGCCTGGCCTTTC TGCACCAGCGCTATACCCGCGACGACCCGCACTACAGCGGCCGGGTCACGGTGCCGCTGCTGTGGGACAAGCGGGAGCAGAAGATCGTCAACAACGAATC
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Amino Acid Sequence |
>hypothetical protein
MTISTPAEHPFAQFVRILGKGKRGARSLTREEAREALDMILDGRVEDTQLGAFLMLLRHKEESSEELAGFTEAVRERLQVPSLRVDLDWPSYAGKKRHLP WYLLAAKCLAGHGVRILMHGGGAHTAGRLYSEQLLAALEIPLCHDWLQVEQALERGHLAFIPLGAWMPVLQRMIDLRNTLGLRSPIHSLVRLLNPLNADC ILQSIFHPGYQETHREASRLLGDRAIVIKGEGGEVEVNPDVVAHLYGCDQGEAWDEEWPALSTHRHMKPEQLDPGFLRAVWDGREGDAYGHLAVLSSMAL ALRALGKNREEAFKEAAHYWATRNESI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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