Pseudomonas aeruginosa MH27, PAMH27_RS10065
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa MH27, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TATCGCGGCAAGGGGCGCGAGTCGGTGGCCTGGAACTCGGCGCTGACCTACGACATGATCTTCACCCAGCCGGTGGTCTACGAACTGGACCGGTTGCAGA TGCCGACCCTGCTGCTGATCGGCGAGAAAGACAACACCGCCATCGGCAAGGACGCCGCGCCGGCAGAACTGAAAGCCAGGCTGGGCAACTACGCGCAACT GGGCAAGGACGCCGCCCGACGGATTCCCCAGGCGACCCTGGTGGAATTCCCCGACCTTGGCCATACCCCGCAGATACAGGCTCCGGAACGCTTCCACCAG GCACTGCTGAAGGGTCTGCAAACCCAGCCCTGAACCATCCACCGGCGGCGCTCTCGCCATCGGCTTCGCCGCGCCTTGCCCGGCGTCAACACCGATGCCT GCCGCCGGCGTTTCACTGCACTGGCTGCGCGACGACGCGTGGCTCGCGTCGCGCAAGCCCACCCACGCCGCGGCCGTTCCCATCCACATGGAGGTTCATC
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| DNA Sequence for Gene |
>PAMH27_RS10065
GTGTTCCCTTGCCAACCCCGTTCGCTACTCGCCGGCGTCCTGCTGGCGAGCGCCCTGCCCGCTCACGCGGAGCTGCCCCACGCGCCCGCCTACATCGATG ACAGCGCCTACCCGGCCGCGGCCCGCCAGCGCATCCTGCCACCGATGTTCGAGCAGAAGCTGGGCAGCCTGCGCTACCTCGCCAAGCCCGGCGACCCCTT GATCACCCAGGCCGAGAGCAGCGACTTCCAGCGCACCAGCGACTACCGCGAGACCCGCGCCTACCTGGAGAAACTGGTAGCCGCCTCCTCCGGCCGCATC GCCCTGCGCGAGTTGCCCGAGCGCAGCGCCGAGGGCCACCCGATGCTGCTGGTGACCGCCTCCACCGAGGCTGACAAGTCCGCCGCCGGCCTGAAGCGCT CCGCCAAGCCGACCTTGCTGGTGGAAGCCGAGATCCATCCCGGCGAGGCCAACGGCAAGGACGCCATGTTCATGCTGCTGCGCGACATGAGCGCTGCCGA CCGCCCGCTCGCCGGGCTGCTGGAGAAGATCAACCTGCTGTTCATCCCGGTGGTCAACGTCGACGGCGACCTGCGCCGCAGCGCCTACGGGCGGATCAAC CAGAACGGCCCGCGGGAGACCGGCTGGCGGGTGAACGGCCGCAATCTCAATCTCAACCGCGACTTCACCAAGCTCGACAGCGCGGAGATCCGCAACGTCG CCTGGGTGTTCAACCACTACGAACTGAGCTTCTTCGCCGACACTCACTCCACCGACGGCGCCATGTATCCCTACGACAGCTCCTACTGCCACAACGGCAA TGGCTGGTCACCGGCGAGCAGCGCCTGGATGGACCAGGTCATGCGCAAGCCGGTGTACCAGGCGCTGGAAAGCCTCGGGCACATGGTCCATGAATGCATC AGCCTGAACGACAATCAGGATCCGACCCAGGGCTACTACCCCTACCGCACCGACCTGGCGCGCTTCTCCAACCAGTACGGCGACATCCGCAACGTGCCGT CGATCCTCATCGAGCAACACGCCCTGCATCCGTACAAGACCCAGGTGCTGGGCAACTACGTGATGCTCAAGGCGATGTTCGAGGTGATCGGCGAGCAGGC CGCCAGCCTGCGCCAGGCCATCGCCAGCGACCGCGAGCGCCTGCTGCGGCAGAAGGAGGTGATCCTCACCTGGAAGCCGGGCGAGGCCACCGAGACGCCG TTCGTGGTGGGCGACTACCGCTACGAGCAATCGCCGGTCACCGGGGCCCGCACCATCGTCTGGAGCAACCGGCCGAAGACGCTGAAACTACCGGTGACCG ACAACGGCGTACCCGACCTGGTGGTGCCGCGTCCCCAGCGTTTCATCGTCCCGGCGCAGTGGCACGAAGTGATCGCCCGGATCAAGGCCCACGGCATCCG CTACACCACCCTGGAGCGTCCGACCGAAATCGCCGTGACCCTGTACCGCATGGACGACATCAAGCTCGCCGATGGCTTCGAACCGGATCGCGTGCAAGGC AACCGGATTCCGGGCTACGAAGGTCGCCTGCTGGTCAGCGGCACGCCGAAGCCGTTCCAGCGCTTGCAGACCTTCCCGGCCGGCTCGCTGTCGATCGACA CCGCCCAGCCGCTGGGCGTCCTGGCCATCGACCTGCTGCAACCGCAGAGTCCGGATTCGTTCTGGTCGTGGGGCTTCTTCAATTCCACCCTGGTGGCCGC CGAGGAGCCGGAGGAATACGTGATGGAGCCGATGGCGCGCAAGATGCTGGCGGAAGACCCGGCGCTGAAGGCCGCCTTCGACAAACGCCTGCGCGAGGAC AAGGCCTTCGCCGCCGATCCGCAGGCGCGCCTGCAATGGTTCTACCAGCGCACGCCGTTCTACGACGTGAACGCCTTCGTCTATCCGGTAGGAGTAGTGT TCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGCCCACCTGGGGCTGACGGCGGATAACGCTGCGCGTTATTCGCCCTACCGCTGGGCTTCGGGAGCCCCGTTCCCTCTCCCGCTTGCGGGAGAGGGCTGG GGAGAGGGAGCCGGTCTCAGGTACCGTCGGTGGGTGTGGGCAGGTTGCTTCTCGGCTTGCGCTTGCGCCTGGGTTTCAGTGGTTTTTCGGGTGGCGGCGA CAGTTCCCGCTTGCGCAGCTTCTTGAGGATTTCCCGATGCTTCTCGCGCCAGGCCGGCACGTCGAGACCGTGGAGTTCGAGCAGCTCGGGGTTGCGCTCC ACCAGATAGACCGCCGCTTCCTGGGCGGCCTCGGCGATCTTCCAGGCGATCGACTGCGGTTCGATGCTGCCTTCATAGGCGATCCAGTCGCTGAACTCCG GAAAGGTCCCGCAGACCTTCTCGAAATCCTCGTCGTGCATGCGCTGCCGGCCACTCTCGATGTTCTCAAGGCGTTTGGGATCCATGCCGACCACTTCGGA
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| Amino Acid Sequence |
>peptidase
MFPCQPRSLLAGVLLASALPAHAELPHAPAYIDDSAYPAAARQRILPPMFEQKLGSLRYLAKPGDPLITQAESSDFQRTSDYRETRAYLEKLVAASSGRI ALRELPERSAEGHPMLLVTASTEADKSAAGLKRSAKPTLLVEAEIHPGEANGKDAMFMLLRDMSAADRPLAGLLEKINLLFIPVVNVDGDLRRSAYGRIN QNGPRETGWRVNGRNLNLNRDFTKLDSAEIRNVAWVFNHYELSFFADTHSTDGAMYPYDSSYCHNGNGWSPASSAWMDQVMRKPVYQALESLGHMVHECI SLNDNQDPTQGYYPYRTDLARFSNQYGDIRNVPSILIEQHALHPYKTQVLGNYVMLKAMFEVIGEQAASLRQAIASDRERLLRQKEVILTWKPGEATETP FVVGDYRYEQSPVTGARTIVWSNRPKTLKLPVTDNGVPDLVVPRPQRFIVPAQWHEVIARIKAHGIRYTTLERPTEIAVTLYRMDDIKLADGFEPDRVQG NRIPGYEGRLLVSGTPKPFQRLQTFPAGSLSIDTAQPLGVLAIDLLQPQSPDSFWSWGFFNSTLVAAEEPEEYVMEPMARKMLAEDPALKAAFDKRLRED KAFAADPQARLQWFYQRTPFYDVNAFVYPVGVVF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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