Strain | Pseudomonas trivialis strain IHBB745, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GTCGGCGATCAAAAGCAAGCTCGCAGAAGGCAGCAAAAGTGCAGTCAGCGGTGCGCTGCTGGCGGCGATGAATACCGCCTCGGAATACGGCTTTGGTGCG GTGATCGCCTCGCTGCCGGGCTTTTTGGTATTGGCAGATTGGCTCAAGGGCATCCCCAACCCGCTGGTCAATGAAGCAATTACCGTGACCCTGCTGGCCG GTATCACCGGCTCCGCGTCGGGCGGCATGAGCATTGCCCTGGCGGCCATGTCCGAGAGCTTTATTTCGGCGGCCCATGCGGCCAATATCCCCCTCGAAGT GCTGCACCGGGTGGCAGCCATGGCCAGCGGCGGCATGGACACCCTGCCCCACAACGGCGCGGTGATCACGCTGCTGGCGGTCACCGGCCTGACCCACCGC GAAGCCTACAAGGACATTTTCGGCATCACGATCATCAAGACCCTCGCGGTGTTCGTGGTGATCGGTACTTTCTACGCCACCGGCATTGTGTGAGGTTTTC
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DNA Sequence for Gene |
>AA957_RS27265
ATGACGACATTGAACGGCAAGACCGCCCTGGTTACCGGCTCCACCAGCGGCATTGGTTTGGGCATCGCGTTGAGCCTGGCAAAGGCCGGGGCCAATCTGA TCCTCAACGGCTTTGGCGACGCCAGCGCGGTGATCGCGCAAGTGCAGGCGTTTGGCGGCAAGGTCGGCCATCACCCGGCGGACGTCAGCGACCCGGCGCA GATCGCCGACATGATCGCCTACGCCGAGCGTGAATTCGGCGGCGTGGATATCCTGGTCAACAACGCCGGTATTCAGCATGTGGCGGCGGTCGAAGACTTC CCGGCTGAGCGTTGGGACTCGATCATCGCGATCAACCTGTCCTCGGTGTTCCACAGCACGCGCTTGAGCTTGCCGGGCATGAAAGCCAAGGGCTGGGGGC GCATTGTCAATATCGCGTCGGTGCATGGCCAGGTCGGTTCAGTGGGCAAGGCGGCGTATGTGGCGGCCAAGCATGGCGTGATCGGGCTGACCAAAGTGGT CGGCCTGGAGACCGCGACCAGTAACGTCACGTGCAACGCCATCTGCCCAGGCTGGGTGCTGACGCCGCTGGTGCAGAAGCAGATTGATGATCGTGCGGCG AAAGGCGTTGACCCGCAGCAGGCGCAGCATGATTTGCTGGCGGAGAAGCAGCCGTCACTGGAGTTTGTGACGCCGCCGCAGTTGGGTGAGTTGGTGTTGT TTTTGTGCAGCGAAGCGGGTAGCCAAGTGCGCGGTGCAGCCTGGAACATCGATGGCGGTTGGCTGGCACAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TTCCAGCTTGCAGAGATCAAAGGTGGGAGCTGGCTTGCCTGCGATAGCGGTGGGTCAGCCGACTCATGTGTAATTGACACACCGTTATCGCAGGCAAGCC AGCTCCCACAGTTTTGACCTGCGTTCGTTCAAAGAATAAGAGACTTGCGTATGTCCGACATCCTCTGGCAACCCTCCTCGGCACGCATCGCCAACACGCG CATGGACCAGTTCCGCCGCTACATCAACGAACACTACAGCGTGCAGCTCAACGACTACCCGGCGCTGCACCAGTGGAGCATCGACCAGCGCCCGGACTTC TGGCGGGCAATCGTGGCGTTCTTCGACGTGCAATTTCGCAGCCCCCCCACCGCGGTGTTGATCGAAGACGCCGAGATGCCCAGTGCCCATTGGTTTCCCG GCGCCACCCTGAATTTCGCCGAGCACCTGCTGCGCCGCCGCGACGATCACCCGGCCGTGGTCGCCATCGGCGAAGACGGCCAGCGCGAGCAATTGACCTA
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Amino Acid Sequence |
>3-hydroxybutyrate dehydrogenase
MTTLNGKTALVTGSTSGIGLGIALSLAKAGANLILNGFGDASAVIAQVQAFGGKVGHHPADVSDPAQIADMIAYAEREFGGVDILVNNAGIQHVAAVEDF PAERWDSIIAINLSSVFHSTRLSLPGMKAKGWGRIVNIASVHGQVGSVGKAAYVAAKHGVIGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAA KGVDPQQAQHDLLAEKQPSLEFVTPPQLGELVLFLCSEAGSQVRGAAWNIDGGWLAQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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