Pseudomonas trivialis IHBB745, AA957_RS24550
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
|
|
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:2.40.170.20 | - | IPR036942 | TonB-dependent receptor-like, beta-barrel domain superfamily | 173 | 777 | 3.9E-47 |
| Pfam | PF07715 | TonB-dependent Receptor Plug Domain | IPR012910 | TonB-dependent receptor, plug domain | 46 | 165 | 9.1E-20 |
| Pfam | PF00593 | TonB dependent receptor | IPR000531 | TonB-dependent receptor-like, beta-barrel | 278 | 786 | 8.8E-34 |
| CDD | cd01347 | ligand_gated_channel | - | - | 51 | 798 | 1.07937E-57 |
| Gene3D | G3DSA:2.170.130.10 | - | IPR037066 | TonB-dependent receptor, plug domain superfamily | 21 | 172 | 7.0E-28 |
| PANTHER | PTHR47234 | - | - | - | 10 | 798 | 0.0 |
| SUPERFAMILY | SSF56935 | Porins | - | - | 31 | 798 | 3.66E-88 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.