Pseudomonas trivialis IHBB745, AA957_RS23690
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0005515 | protein binding |
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.25.40.10
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ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 137 | 167 | - |
| Coils | Coil | Coil | - | - | 305 | 353 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 254 | 276 | - |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | IPR011990 | Tetratricopeptide-like helical domain superfamily | 519 | 573 | 2.9E-6 |
| Gene3D | G3DSA:3.10.350.10 | LysM domain | IPR036779 | LysM domain superfamily | 150 | 227 | 8.9E-9 |
| Gene3D | G3DSA:1.20.58.2200 | - | IPR038440 | FimV, C-terminal domain superfamily | 786 | 847 | 2.1E-24 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 242 | 276 | - |
| NCBIfam | TIGR03505 | JCVI: FimV/HubP N-terminal domain | IPR020012 | Motility protein FimV, N-terminal | 170 | 241 | 1.1E-25 |
| CDD | cd00118 | LysM | IPR018392 | LysM domain | 164 | 216 | 6.67422E-6 |
| NCBIfam | TIGR03504 | JCVI: FimV/HubP C-terminal domain | IPR020011 | Motility protein FimV, C-terminal | 804 | 847 | 3.1E-19 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.