Pseudomonas trivialis IHBB745, AA957_RS23590
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas trivialis strain IHBB745, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCCTTTAACCTGGAACATGGCATCACGCCCAAGGGCGTGTTCAAGGACGTTGCCGACATCATGGAAGGCGCCGTGGTACCGGGCTCGCGCAGCAAAAAGC GCAAGGGCATGGCCAAGGCTGCCGAGGAAAGCGCCAAGTACGAGAACGAACTGCGCTCGCCGAGTGAGATCACTAAGCGAATTCGGCAATTGGAAGAGAA GATGTACCAGTTGGCCCGGGATCTGGAGTTTGAGGCGGCGGCGCAGACGCGGGATGAGATTGGTAAGTTGCGTGAGCGTCTTTTGGCTGTTTGATTTGCG CTGACAGGACTGGCCTCATCGCAGGCAAGCCAGCTCCCACATTTGACTGTATTCACAAATCAAAATGTGGGAGCTGGCTTGCCTGCGATGGCAACACCTC GGTCTCCCTGGCTCACCCAGGCTGGAGCCCAACCACCCCAGGCTGTTACCATTCCCCCCTTGTTTCAATTTTCAGCTTTATCGCCCATTCGAGACCTGCC
|
|
| DNA Sequence for Gene |
>AA957_RS23590
ATGACCACCGTCCGCACGCGCATTGCGCCATCGCCTACTGGGGATCCCCACGTCGGCACTGCTTACATCGCCTTGTTCAACTACTGCTTTGCCAAGCAGC ACGGCGGTGAATTCATCCTGCGGATCGAAGACACCGACCAACTGCGCTCTACCCGTGAGTCGGAACAGCAGATTTTCGATGCCCTGCGCTGGTTGGGCAT TACCTGGGCGGAAGGCCCGGACGTCGGCGGCCCGCACGGCCCGTATCGCCAGAGCGAGCGCAGCGACATCTACAAGCAGTACACCCAGCAACTGGTCGAC ATGGGCCATGCGTTCCCATGCTTCTGCACCGCCGAAGAACTGGACCAGATGCGCGCCGAGCAACAGGCTCGCGGTGAAACCCCACGCTACGATGGCCGCG CGCTGCTGCTGTCGAAAGAAGAAGTGGCCCAGCGCCTGGCCGCTGGCGAACCGCACGTTATCCGCATGAAAGTGCCAAGCGAAGGCGTGTGCGTGGTGCC GGACATGCTGCGCGGTGATGTCGAGATCCCGTGGGATCGCATGGACATGCAAGTGCTGATGAAGACCGACGGCCTGCCGACGTACTTCCTGGCCAACGTG GTCGACGACCACTTGATGGGCATCACCCACGTATTACGCGGTGAAGAATGGTTGCCGTCGGCGCCGAAACTGATCCTGCTCTATGAGTACTTCGGCTGGG AACAACCGCAGCTGTGCTACATGCCGCTGCTGCGTAACCCGGACAAGAGCAAGCTGTCCAAGCGCAAGAACCCGACCTCGGTGACCTTCTACGAGCGCAT GGGCTTCATGCCGGAAGCCATGCTCAACTATTTGGGCCGCATGGGTTGGTCGATGCCGGACGAGCGCGAGAAGTTCTCGCTGCAGGAAATGGTCGACAAC TTCGACCTGTCCCGTGTGTCCCTGGGCGGGCCGATCTTCGATATCGAGAAGCTGTCGTGGCTCAACGGCCAATGGCTGCGTGACCTGCCGGTGGAAGAGT TCGCCAGCCGTGTGCAGCAGTGGGCGTTGAACCCTGAGTACATGATGAAGATCGCGCCGCTGGTGCAGGGCAGGGTGGAAACATTCAGCCAGGTCGCACC GTTGGCCAGCTTCTTCTTTGCCGGTGGCGTGAACCCGGACGTGAAGCTGTTCGAATCCAAGAAGCTCTCCGGCGATCAGGTGCGCCAGTTGATGCAGTTG ATCCTGTGGAAGCTCGAAAGCCTGCGCCAGTGGGAGAAGGATGCGATCACCGCAACAATCCAGGCGGTCGTGGAATCCCTGGAATTGAAGCTGCGCGACG CCATGCCGCTGATGTTTGCCGCGATCACCGGGCAGGCCAGTTCGGTGTCGGTACTCGATGCGATGGAAATTCTCGGCCCGGACCTGACGCGTTTCCGTCT ACGCCAAGCCCTTGATTTGCTTGGTGGTGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAACTGCTGGCTGCTATCGCCTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCAGGCTGCTGTAACGGTGAAACCCCGGTTTTCCGGGGTTTCACCGGTAAGTGATTGTTATCCCGGCAAAAAATTTTGGAAATTGTTGAAAATAAATTTG ACACACTTCCAAACCGCCATTAAGATTCGCCCCGTCCTCACCGATGAGGGGCTATAGCTCAGCTGGGAGAGCGCTTGCATGGCATGCAAGAGGTCAACGG TTCGATCCCGTTTAGCTCCACCAATTTACAAGTTCAAGGTCTGGCCACACCGTCCTTGAATTGATGTACAGAAGGTTTTGTCCCCTTCGTCTAGTGGCCT AGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAGTTTCAACAAGCAGTTCGAAAGGTCTGCTGCGTCGCGAGACGAAA AATCCGGGGCTATAGCTCAGCTGGGAGAGCGCTTGCATGGCATGCAAGAGGTCAACGGTTCGATCCCGTTTAGCTCCACCAATTTTACAGGTTCAAGGTT
|
|
| Amino Acid Sequence |
>glutamyl-tRNA synthetase
MTTVRTRIAPSPTGDPHVGTAYIALFNYCFAKQHGGEFILRIEDTDQLRSTRESEQQIFDALRWLGITWAEGPDVGGPHGPYRQSERSDIYKQYTQQLVD MGHAFPCFCTAEELDQMRAEQQARGETPRYDGRALLLSKEEVAQRLAAGEPHVIRMKVPSEGVCVVPDMLRGDVEIPWDRMDMQVLMKTDGLPTYFLANV VDDHLMGITHVLRGEEWLPSAPKLILLYEYFGWEQPQLCYMPLLRNPDKSKLSKRKNPTSVTFYERMGFMPEAMLNYLGRMGWSMPDEREKFSLQEMVDN FDLSRVSLGGPIFDIEKLSWLNGQWLRDLPVEEFASRVQQWALNPEYMMKIAPLVQGRVETFSQVAPLASFFFAGGVNPDVKLFESKKLSGDQVRQLMQL ILWKLESLRQWEKDAITATIQAVVESLELKLRDAMPLMFAAITGQASSVSVLDAMEILGPDLTRFRLRQALDLLGGVSKKENKEWEKLLAAIA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|