Strain | Pseudomonas trivialis strain IHBB745, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GATAGCTGAGCTGGGCCTTGAACGATGAGGTGATGGTCGGCGCCGACTGCAGGCGGAAGTAGGCGTCCTGCACTACGTCTTCGGCACGGGAGCGGCAGCC GGTAATACGTGCCGCGATCTTCACCAGAATCAGCCGATTATCGACGAACGCCTGGAGAAGGGGTGAGTCGCACCTGCCTGTGGATACTTGTTCCGTCATG GAAATCACCTTGTCGCAAAAGAGGTTAGGGGAGGGCGTCCTTGCTGAGGCCTCCTACACATCGGGCAACAAATTAGGCTGAATGATAATGATTGTCAAAT GAGAAGGCGAACTAATCTTATGCTTTCTTGTTAGGTGTGAACCACGTCTCGCTCTTCCGGGCGACTAATTATTTGCCGGTGCCGTCCGTTCTTCTGGGTG ACAGGTCCGTTAGTAAAACGACCAAGGATCAGCACCCGCAGGAGGACGAGATGGGTTTGCATCGTGCACACAGCGTGTTTCAGTTTGGAGTCGTCGCCTG
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DNA Sequence for Gene |
>AA957_RS22870
ATGAGTACGCCGGCTCGACTGCGCCTGTTCTGCCTGCCTTATTCGGGCGCCAGCGCCATGGTTTACGCGCGTTGGCGCCGGGTCCTGCCGGACTGGTTGC ATGTGTGCCCGCTGGAGTTGCCCGGGCGTGGCATGCGTATGGACGAGCCGTTGCAGCGCGATATCAAAACCTTGGCCGCACAGCTCGCGGATGAAATCAG TCACGACCTGAAAGGCCCCTATGCTCTGTTCGGCCACAGCCTCGGCGGCCTGCTCGCCTTCGAACTGGCTCACGCGCTGAAGGCGCGCAATGTGCCTGCG CCGCTGGCGCTGTTCGCTTCCGGTACAGCCGGGCCGGCACGCCGCGACGTCAGTGAATACGCCATCGAAAAGACCGACGAACAGCTGATCGCCCGTCTGC GCGAACTGCAGGGCACCGCCCAAGAAGCCCTGGCCAACCCCGAGTTGATGCAGTTGATGCTGCCAATCCTGCGCGCCGATTTCCTCTTGTGCGGCAGCTT CACCTACGGCGAGCGCGAGCCGTTAGGCATGCCCATCCACGTGTTCGGCGGCAAACAGGACAGCGTACGCGCCGACCAATTGCTCGACTGGCAACTCGAC GCCGCCAGTGGCTTTTCCCTGGACATGTTCGACGGCCACCACTTCTTCCTCATCCAACACGAAAGCGCTGTGCTGCGCTGCCTGCGGCGCTACGCCGACG AACACATGGCCCGCTGGCGCAATGGCGCGGCGCGGCAACTGGCCGCCGGCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AAGCCCCCCAATTCCCGAATTTCCCGCAAGCCGATTTCAGGCAGGAACCCCATGATGGACGCCTTCGAACTTCCCCAAACGCTGGTCCAGTCCCTTCAAC GTCGCGCCGCGCAGACGCCGGACCAGGTCGCTCTGCGCTTCCTGGCTGAGTCGGCCGAGCACAGCGTTGTGCTCAGTTACCGCGATTTGGACCTGCGCGC CCGCACCATCGCCGCGGCCTTGCAGGCCAATGCGGACCTGGGCGACCGTGCGGTGCTGTTGTTCCCCAGCGGCCCGGATTACGTCGCGGCGTTTTTTGGT TGCCTGTACGCCGGGGTCATTGCGGTGCCGGCTTATCCACCAGAGTCGACCCGTCGTCACCATCAGGAGCGCCTGCTCTCGATCATCAGCGATGCCGAGC CGCGCCTGCTGCTGACCATCGCCAGCCTCGCCGATGGCCTGGCGCAGATCGAAAACGCGCCAATGGTATTGAGCGTCGATACCTTGGGCAGCACTGACAC
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Amino Acid Sequence |
>thioesterase
MSTPARLRLFCLPYSGASAMVYARWRRVLPDWLHVCPLELPGRGMRMDEPLQRDIKTLAAQLADEISHDLKGPYALFGHSLGGLLAFELAHALKARNVPA PLALFASGTAGPARRDVSEYAIEKTDEQLIARLRELQGTAQEALANPELMQLMLPILRADFLLCGSFTYGEREPLGMPIHVFGGKQDSVRADQLLDWQLD AASGFSLDMFDGHHFFLIQHESAVLRCLRRYADEHMARWRNGAARQLAAG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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