Strain | Pseudomonas trivialis strain IHBB745, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GTTCCTGATCGAAAAATCCGCCTGCGAGCTGGAAATCGACCTGCGGGGCGAACGCCACCCCTGCGCACTGCCGATTGCCGACGCCCCCACCCTGCCCGCT GCGCCGATCGACCCACCCAAACCCCAAGGCCGCGCCGACGCCAGCGTGCCTCTGGTGAAACTGGCCGTGGCGCGCTCCGGCGACAAGGGTAACCACAGCA ACATCGGCGTGATCGCCCGCGACCCCGACTACCTGCCGTGGATCGCCGAGGCGCTGACCCCGGAGGTGATTGTCGATTGGATGAGCCACGTACTGGATCC CTTGCATGGCCGCGTCGAGCGCTGGTATTTGCCCGGCAGCCACAGCCTCAATTTCCTGCTGGAAAACGCACTCGGTGGGGGTGGCATCGCCAGTCTGCGC ATCGACCCGCAAGGCAAAGCCTTCGCCCAGCAACTGCTGGAAATCCCGATTGCCGTGCCGCAGCACATAGCCGATCAACTCACATAACAGGAGCGTTGCC
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DNA Sequence for Gene |
>AA957_RS22845
GTGGCCTTCGACTCAATCTTCAAAGCCGACCTGTTCCAGGGGCAGACCGTGATTGTCACCGGCGGGGGCAGCGGGATTGGCCGTTGCACTGCGCATGAAT TGGCAGCCTTGGGCGCCCAGGTGATTCTGGTGGGACGCAAGCCGGAAAAGCTGGAGAAGGTCGCGGCGGAAATTGCTGAAGACGGTGGCGTTGCTCATTG GGGCGCTTGCGATATTCGCGATGAAATCAGCGTCACAACACTCGTCAGCCACCTGATTCAACAATACGGCCCGATCCACGGCCTGGTAAATAACGCCGGT GGCCAATACCCGTCACCGCTTGCTTCAATCAACCAGAAAGGCTTTGAAACCGTCGTCCGCACCAACCTGGTCGGCGGTTTCCTGATGGCGCGGGAAGTGT TCAACCAATCCATGAGCAAGCATGGCGGTGCCATCGTCAACATGCTCGCCGACATGTGGGGCGGCATGCCCGGCATGGGCCACTCGGGCGCGGCGCGTGC GGGCATGGATAACTTCACCAAGACGGCGGCTTTTGAATGGGGTTGTGCCGGCGTGCGGGTTAACGCCGTGGCGCCCGGCTGGATCGCGTCCAGCGGCATG GACACTTACGAAGGCGCCTTCAAGGCCGTGATCCCGACGTTACGCGAACACGTGCCGCTTAAGCGCATCGGCACCGAATCGGAAGTCAGCGCGGCCATCG TCTTCCTGCTCAGCCCCGCCGCCGCCTTTATCAGCGGCAGCACCTTGCGCATCGACGGCGCCGCCAGCCTGGGCAGCCGCGCCTGGCCGTTGCACAAGGC GCAACCGCCGAGCGAACCGTTCAACGGTTTCCATCGCGCGTACCTGCCGGATGTGCTCAAGGCGGAGAAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCATGCCGGTGATTGAATCCCTGATCGACGCCCACAGCGCCCAATTCGCGCAAAATCGCGAAGCCATGCTGGCGGCCATCGCCCAACTGCGCCAGTTGG AACACACCCTGCTGAGCAAGGCGCAAGAAGCCAAGCCCAAGTTCGACACGCGCGGCCAACTGCTGCCCCGCGAGCGCCTCAACCTGCTGCTGGACCCTGG CGCACCGTTTCTGGAGCTGGCCAGCCTGGCCGGCTACAAGCTGCACGACGACAAGGACGGCAGCGCCGCCGGCGGTGGGCTGATCGCCGGCATCGGCTAC GTCAGCGGCGTGCGCATGCTGGTGGTGGCCAATAACAGCGCGATCAAGGGCGGCACCATTTCCCCCACGGGCTTGAAGAAATCCCTGCGCCTGCAACAGA TCGCCATGGAGAACAAACTGCCGGTGGTGACCCTCGCCGAAAGTGGCGGCGCCAACCTCAATTATGCCGCCGAGATTTTCGTCGAAGGCGCGCGCAGCTT
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Amino Acid Sequence |
>2,4-dienoyl-CoA reductase
MAFDSIFKADLFQGQTVIVTGGGSGIGRCTAHELAALGAQVILVGRKPEKLEKVAAEIAEDGGVAHWGACDIRDEISVTTLVSHLIQQYGPIHGLVNNAG GQYPSPLASINQKGFETVVRTNLVGGFLMAREVFNQSMSKHGGAIVNMLADMWGGMPGMGHSGAARAGMDNFTKTAAFEWGCAGVRVNAVAPGWIASSGM DTYEGAFKAVIPTLREHVPLKRIGTESEVSAAIVFLLSPAAAFISGSTLRIDGAASLGSRAWPLHKAQPPSEPFNGFHRAYLPDVLKAEK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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