Pseudomonas trivialis IHBB745, AA957_RS22115

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas trivialis strain IHBB745, complete genome. [Details]
DNA Sequence Upstream of Gene
GCTGTTCGTGCAGGAAGGCCGCAAGGTTTTCCGCGATGTGTGCCCGATGGTGGCCGAGCTGATCGGTGTGCACCTGGCGGAAAACCAGCTGAACGTGGCC GACGTGAAGCGCTTCTGGCTGCATCAGGCTAACCTGAGCATGAACCACCTGATCGTGAAGAAACTGCTCGGCCGCGAAGCCACGGTGGAAGAAGCGCCGG TGATCCTCGACACGTACGCGAATACCAGTTCGGCAGGTTCGGTGATTGCGTTTCACACCTACCAGGACGACCTGCCCAAGGGCTCCGTGGCGGTGCTCAG TTCGTTTGGCGCGGGCTATTCGATTGGCAGCGTGATCCTGCGCAAACGCTGATCTACCGGTCGATCACGGTCAACTGTGGGAGGCTGGCTTGCCTGCGAT GCAGACACCTTGGTGTATCAGTTACACCAAGGTGATGCCATCGCAGGCAAGCCAGCTCCCACAGGGGATCGGATTTCGACAGTGAAATCGAGGTTAACCC
DNA Sequence for Gene
>AA957_RS22115
ATGGCAGCAGCGGACGACGCGCACCTGCTTGAACGTCTGCTCAAGGGTGAGCAGCGGGCCTATAAGGAGTTGGTTGCCACCTACCAGAGCGCCATGCGTG CGGTGGCCTATGCCATCGTCGGCCAGCGCCACGCCGACGAAATCGTGCAGGATGCGTGGCTGTCGGTGGTACGCAACCTGGCCAAATTCGAAGGGCGTTC CAGCCTCAAGACCTGGCTGCTGACCATCACCGCCAACGCGGCCAAGGGGCGCTACAAGCAGAATCGTCGCGAGGTATTGCTCGACGATCTGCCTTCACCC CACGGCACCATTGGTGATGACCGTTTCTCCCCGGACGATGGCCATTGGGCGGTCGCCCCCTACGCCTGGCACCAGGACACTCCGGAAGCCTTGCTGACCG AGGATGAACTGCGTGAATGCCTGGAACACACATTGCTGAGCCTGTCTGAGCTGCAAAGCAGCGTGCTGGTGCTGCGTGAACGCCAGGGCCTGGAGCTGGA AGAGATTTGTAATCTCCTGACGCTGTCGCTCTCCAATGTCCGTGTGCTGTTGCACCGAGCGCGGCTTAAAGTCTTCGCCACGGTGGAGCATTTTGAGGAG ACGGGCGAATGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCTGTAAAGAACAAGTGGCACGTTCCAGTGACTATCTCGATGGGCAATTGACCTTTCGCGAACGTCTGCTGGTGCGTCATCACTTGATGTTCTGCCCGAA CTGCCGACGGTTTATCCGCCAGATGCGCCTGATGCAGGCAACGCTGAAGATAATGCCGGATGAGCCGGTTGAAGGTGTGGATGCCTTGGCGCAGCGGCTG GCTGCCGAGCGGCTCAAGGATCACAAAGGCGGGGAATAAGCAGGCTCGCGCGGTTGGATCGAACGGATGATGGGGATCGATCCAACCGCGCAAGACTGTT AAAGAAGCAGCTTCAAGCGGTTGGCTTGAAGCTGCAAGTGACATGCTCTTCCTTGAAGCGTGTAGCGTGAAATTCACCGCTGTCCGTCTTAGAACTTGGC TTCTGCGTCCAACTGCAGGGTGTTGGCGTTGGCATCGCGGTAGCCTGCGGCGCTGGCGTAGTCCGCTTTGGTCAGGAAGTAAGTGGCGCCGACAGCGAAG
Amino Acid Sequence
>RNA polymerase subunit sigma-24
MAAADDAHLLERLLKGEQRAYKELVATYQSAMRAVAYAIVGQRHADEIVQDAWLSVVRNLAKFEGRSSLKTWLLTITANAAKGRYKQNRREVLLDDLPSP HGTIGDDRFSPDDGHWAVAPYAWHQDTPEALLTEDELRECLEHTLLSLSELQSSVLVLRERQGLELEEICNLLTLSLSNVRVLLHRARLKVFATVEHFEE TGEC
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site