Pseudomonas trivialis IHBB745, AA957_RS16760
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas trivialis strain IHBB745, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CGCTCAGGGCGGCCCGCTGATGCACGTGATCGCCGGCAAGGCCGTGTGCTTCAAGGAAGCCCAGGAGCCTGGCTTCAAGGTCTATCAGCAACAAGTGATT GATAACGCCCAGGCCATGGCCGAGGTGTTCATCAAGCGCGGCTACGACGTAGTGTCCGGCGGCACCGACAACCACTTGTTCCTGGTCAGCCTGATCCGTC AGGGCCTCACCGGCAAAGACGCGGACGCCGCCCTCGGTCGCGCCCACATCACCGTCAACAAGAATGCTGTGCCGAATGACCCGCAGTCGCCGTTCGTGAC CTCGGGCCTGCGCATCGGCACCCCGGCGGTTACCACGCGTGGTTTCAAAGTGCCGCAGTGCATCGAACTGGCCGGCTGGATCTGCGACATCCTCGACAAC CTCGGCGACGCTGATGTCGAGGCCAACGTGGCCAAGCACGTGTCTGCCCTGTGCGCTGATTTCCCGGTTTATCGCTGAGCGCGGTTTTGGAGTAATGACT
|
|
| DNA Sequence for Gene |
>AA957_RS16760
ATGCAACGCTACTCGGGCTTCGGCCTCTTCAAGCACTCACTCAGCCACCACGAAAACTGGCAGAAGATGTGGCGCACGCCCACACCTAAAAAGGTCTACG ACGTGGTCATCGTCGGCGGCGGCGGGCATGGTCTGGCGACCGCTTATTACCTGGCCAAGGAGCACGGCATCACCAACGTGGCCGTGGTCGAGAAAGGCTG GCTGGGCGGCGGTAACACCGCGCGCAACACCACCATCGTGCGCTCCAACTACCTGTGGGACGAGTCGGCGCACCTGTACGAACACGCCATGAAACTCTGG GAAGGCCTGTCCCAGGACCTGAACTACAACGTGATGTTCTCCCAGCGTGGCGTGTACAACCTGTGCCATACCCTGCAAGACATCCGTGATTCCGAGCGTC GCGTCAGCGCCAACCGCCTCAACGGCGTGGACGGCGAACTGCTCAACGCCAAGCAAGTGGCCGACGAGATCCCGTACCTCGACTGCTCGAAAAACACTCG CTACCCGGTCCTCGGCGCCACCGTGCAACGTCGCGGCGGCGTGGCCCGTCACGATGCCGTCGCCTGGGGTTTTGCCCGCGCGGCTGACGCACTCGGTGTG GATTTGATCCAGCAGACCGAAGTGATCGGCTTCCGCAAGGAAAACGGCGTGTGCATCGGCGTGGAAACCAACAAGGGCTTTATCGGCGCCAAGCGCGTTG GTGTGGTCACGGCCGGTAACTCCGGTCACATGGCTTCGCTCGCCGGCTTCCGCCTGCCGATCGAGTCCCACCCGCTGCAAGCACTGGTGTCGGAGCCGAT CAAGCCGATTATCGACAGCGTGATCATGTCCAACGCCGTGCACGGTTACATCAGCCAGTCCGACAAGGGCGACCTGGTGATCGGCGCCGGTATCGACGGT TACAACGGCTACGGCCAGCGCGGTTCGTACCCGGTGATCGAGCACACCATCCAGGCCATCGTCGAGATGTTCCCGGTGCTGTCGCGCGTACGCATGAACC GCCAGTGGGGCGGCATCGTCGACACCACGCCGGATGCGTGCCCGATCATCTCCAAGACGCCGGTTCCGAACATGTTCTTCAACTGCGGTTGGGGCACCGG TGGTTTTAAAGCGACTCCGGGCTCAGGCAACGTGTTTGCCGCCAGCCTCGCCAAGGGTGAAATGCACCCATTGGCCGCCCCTTTTTCCATCGACCGTTTC CACAACGGTGCGTTGATCGACGAACACGGCGCTGCGGCCGTCGCCCACTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CAGGAGAAATTCCCTATGTTGCATATCTTCTGTCCTCACTGTGGCGAACTGCGCTCCGAAGAGGAATTCCACGCGTCCGGCCAAGCGCACATCCCGCGCC CGCTGGACCCGAACGCCTGCACCGATGAGGAGTGGGGCGACTACATGTTCTTCCGCGATAACCCGCGGGGCCTGCACCACGAGCTGTGGATTCACGCCGC CGGTTGCCGCCAGTATTTCAACGCGACCCGCGACACCCTGACCTACGAAATTCTTGAAACCTACAAGATCGGCACCAAGCCGCAATTCACCGCCAAGGCT GCTGGAGAGAAGGTATGAGCCAGACCAATCGCCTGTCCAACGGTGGCCGGATCGACCGCAATAAAGTCCTCACGTTTACCTTCAACGGCCAGAGCTACAA AGGCTTTGAAGGCGACACACTGGCCGCCGCCTTGCTCGCCAACGGCGTCGACATCATCGGCCGCAGCTTCAAGTATTCGCGCCCACGCGGGATCTTTGCC
|
|
| Amino Acid Sequence |
>sarcosine oxidase subunit beta
MQRYSGFGLFKHSLSHHENWQKMWRTPTPKKVYDVVIVGGGGHGLATAYYLAKEHGITNVAVVEKGWLGGGNTARNTTIVRSNYLWDESAHLYEHAMKLW EGLSQDLNYNVMFSQRGVYNLCHTLQDIRDSERRVSANRLNGVDGELLNAKQVADEIPYLDCSKNTRYPVLGATVQRRGGVARHDAVAWGFARAADALGV DLIQQTEVIGFRKENGVCIGVETNKGFIGAKRVGVVTAGNSGHMASLAGFRLPIESHPLQALVSEPIKPIIDSVIMSNAVHGYISQSDKGDLVIGAGIDG YNGYGQRGSYPVIEHTIQAIVEMFPVLSRVRMNRQWGGIVDTTPDACPIISKTPVPNMFFNCGWGTGGFKATPGSGNVFAASLAKGEMHPLAAPFSIDRF HNGALIDEHGAAAVAH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|