Strain | Pseudomonas trivialis strain IHBB745, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CGCTTCGCCACGTTCTGGGTGGAAGACGGTGAGATCAAGGCGCCGGTGAGTACCATGCGGTTTGATGACAGCGTCTATAGCCTGCTTGGTTCGCAGCTTG AAGCCCTGACCGGTGATCGGGAGTTGCTGTTGTCGGCGAGTACTTATAGCCAACGCAACACGGCCTCTAATCTGTTGCCAGGGGCCTTGGTAAAACGCCT GACGCTCACTTTGTAAATACACCCCCTGTGGGAGCGGGCTTGCCCGCGATGGCGGCGTGTCAGTCAACTCGCTTGGTGACTGACCTACTGCCATCGCGGG CAAGCCCGCTCCCACATTATCTTGTGTTGATTCAGACACCTCGCCTCGCCCCTTCCTACCGCTAAATCCCATCTCGCTCTTGTTCCCGCGTGCCCTGTTG TCGCCTGTAAAAAACCCCGATATAACGGTTAGCGGCATCCCGCCACCCTACAGGAAGTACTGCATGCACTTGCCCGGTATGGGCAAGCCGGAGCGTTGAC
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DNA Sequence for Gene |
>AA957_RS16595
ATGGACCATGGAAGTTTCGTCATACAAAAGCTGTTCAAGCACTACAACGTTCACGTCGAGCAGTTAGGTAACGATCCGCAGAAGAAAACCGTGCTGATGG TAAACGGCGCACTCTCGACCACGCGGTCCTTTGCACGCACCAGCAAATGCCTGGCCGAGCATTTCAATGTGTTGCTGTTCGACTTGCCGTTCTCCGGCTA TTCCCGCGAGCACAACACCGACCTGGACCTGGTAACCAAGGACGACGAGGTGCAGATGCTGCGCGCGCTGGTCGAGCGCTTCCAGGTCAACCACCTGGTG TCGGCCTCCTGGGGCGGCATCTCCACGTTGCTGACCCTCGCGCATAACCCGCCCTCCATCGAAAGCTCGGTGGTGATGGCCCTGGCGCCCAACCTCAACC AAGCCATGCTCGACTATGTGGAGCGCGTTCGCGTGCTGATCGAGGCGGATGACAAGTCCGCCGTCGGCCACTTGCTCAATGAAACCGTGGGCAAATACCT GTCGCCCAGGCTCAAGCGCAACAACCATCGGCACCTGTCGAGCATGGCGACCACCGAGTATCGCCAGGCGCGTTTTCATATCCACCAGGTGTTGGCTTTG GGCGATGGCAACTACCTGCCGGCGCTCAGGCAGATTGAAACACCGGTGCACTTCCTCAACGGCGCTCTGGACGAGTACACCCCGGCCGCGGAGGCACAGT TGTTCAGGCAATACGTGGGCCGCAGCAGCTTTGCCGTGGCCGAACACACCGGGCACTTGCTCGACCTCGAATCCAGCGAAGCCGCCGTGGCGGTGCACCG TGAACTGCTGGATTTCCTGGTGGGAAAAGGGGCGACGAATGGCGCATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCGCCAACACATAGCCTGCTAACAAAAAGGTTTTCCATGCCGAACCGCGTCCCGCTTGATGCCAAGACCGCCCACTGGCTGCCCTGGGTGGTAGCGATTG CCTTCTTCATGCAGTCGCTGGACGGGACGATTCTGAACACGGCACTGCCGGCCATGGCCCGCGACCTCGCGGAAAACCCGCTGCGCATGCAAGGGGTGGT GATCGCCTACATGCTCACCGTCGCCTTGCTGATCCCGGCCTCGGGCTGGATCGCCGACCGCTTCGGCACCAAAAAAATCTTCTTTGGCGCAATCATGCTG TTCAGCATTGGATCGCTCCTGTGCGCCTTGTCCAGCAGCTTGAGCATGCTGGTGGGCGCACGGGTGATCCAAGGGTTAGGTGGCGCGCTGATGCTGCCGG TTGGGCGGCTGGTGGTGTTACGCGCGTATCCGCGCTCCGAACTGGTGCGCATCATGGGCTTCATTACCATCCCCGGTTTGCTCGGCCCGTTGCTTGGGCC
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Amino Acid Sequence |
>MFS transporter
MDHGSFVIQKLFKHYNVHVEQLGNDPQKKTVLMVNGALSTTRSFARTSKCLAEHFNVLLFDLPFSGYSREHNTDLDLVTKDDEVQMLRALVERFQVNHLV SASWGGISTLLTLAHNPPSIESSVVMALAPNLNQAMLDYVERVRVLIEADDKSAVGHLLNETVGKYLSPRLKRNNHRHLSSMATTEYRQARFHIHQVLAL GDGNYLPALRQIETPVHFLNGALDEYTPAAEAQLFRQYVGRSSFAVAEHTGHLLDLESSEAAVAVHRELLDFLVGKGATNGA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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