Pseudomonas trivialis IHBB745, AA957_RS16280
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas trivialis strain IHBB745, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GACCCGAACCTGTCGGTGATCCTGGAAACCCTGACCGCGCTGGGCACCCAGCAGATCATGGGCCAGGCCTATATTCCGGCGATCAAGGACGGCGACAAGC GCATCCTGATGATCGACGGCGAACCCGTGGATTACTGCCTGGCGCGTATCCCGGCAGCCGGCGAAACACGCGGCAACCTGGCCGCCGGTGGTCGCGGCGA AGCACGGCCGTTGTCGGACAAGGATCGCTGGATCGCGTCCCAGGTGGGCCCGACCCTGCGTGAAAAGGGCTTGCTGTTTGTGGGCCTGGACGTGATCGGT GAGAACCTGACTGAAATCAACGTCACCAGCCCGACCTGTATCCGCGAGATCGACAATGCATTTGGCACGAACATCGGCGAAATGCTGATGGCCGCCATTG AGCGCAAGCTACAAGCCAAGTGACATAGAACAGCCGGACACATACCAACATTGCGTTATCATGCGCCACCTGTGAAACGCGCGATGTTGGTTTTTTTGTC
|
|
| DNA Sequence for Gene |
>AA957_RS16280
ATGACACTCCCGTCCGAACTGCCCCCCGAACTCTCCCACAGCGGCGTGCGCCCGGCTGATCGGCTCGGATTTACCCTGTTCCTGGCGGCATTGATTCACC TGGCCCTGATCCTCGGCGTGGGATTTACGATGGTCGAACCCAAGCAGATCAGCAAAACCCTGGAAATCACCCTCGCCACGTTCAAGAGCGAAAAAAAGCC CGAGAAGGCCGACTTTCTCGCCCAGGACAATCAGCAAGGCAGCGGCACCCTGGACAAGAAAGCCGTACCCAAGACCACCGAAGTGGCGCCGTTCCAGGAC AACAAGGTGAATAAAGTCAGCCCGCCGCCGACGCCTAAGCCTGAGGTCAAGCAAGCCGCACCCAAGCCTGCGGTGACCACCGTCGCACCCAAACCGCAAA AAGCGCCGACCCAGCGCGAAAAGGCCAAGACCGAACCGAAACCCGAGCCCGTCAAGCCGGCGCCGACCTTCGACAGCTCGACGCTGACCGATGAAATTTC CAGCCTGGAAGCGGAGCTGGCCAACGAACAGCAGTTGTACGCCAAGCGCCCGCGTATCTACCGGCTGAACGCCGCCTCGACCATGCGCGACAAAGGCGCT TGGTATAAGGACGAATGGCGCAAGAAGGTCGAGCGTATCGGTAATCTTAACTACCCGGATGAGGCAAGGCGCCAGCAGATCTATGGCAATTTGCGCTTAC TGGTGTCGATCAACCGTGACGGTACGTTATATGAGGTGCAGGTGCTGGAATCGTCAGGCCAGCCGCTGCTGGACCAGGCCGCCCAGCGCATCGTGCGCCT GGCTGCGCCCTTTGCCCCGTTTACCGGGGACTTGAATGATGTGGACCGCCTGGAAATCATCCGCACCTGGAAGTTCGCCAAGGGCGATCGGCTTTCCAGC AATTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TTACACAGATCGTTCCCACGCTCCGCGTGGGAATGCCGCCCCGGACGCTCCGCGTCCCGCTTTAACGTCGTGACGCAGAGCGTCACAAGATGCATTCCCA CGCAGAGCGCGGGAACGATCTTCAAAACCCCAGCTTGTCAGTTCGCCCCTCCAACGCCACACTAGTGGACATGAAAAATGTCAGCCCGACCTACCTCAAG CACCAATTCCTGATCGCCATGCCCCATATGGCCGACCCGAACTTTGCGCAGACCTTGACCTACATCGTCGAGCACACGGCCAATGGTGCCATGGGGTTAG TCGTAAACCGCCCGCAAGAGCTGAACCTGGCGGATATCCTCGAACAACTGCGACCGGACGTCGACCCGCCGACCCGTTGCCAGGACGTGCCGATCTACAT CGGCGGGCCGGTGCAGACTGATCGCGGTTTTGTACTGCACCCCACCGGGCCGAAGTTCCAGGCCACGGTTGACCTTGAAGGTGTGTCGCTGTCCACGTCC
|
|
| Amino Acid Sequence |
>energy transducer TonB
MTLPSELPPELSHSGVRPADRLGFTLFLAALIHLALILGVGFTMVEPKQISKTLEITLATFKSEKKPEKADFLAQDNQQGSGTLDKKAVPKTTEVAPFQD NKVNKVSPPPTPKPEVKQAAPKPAVTTVAPKPQKAPTQREKAKTEPKPEPVKPAPTFDSSTLTDEISSLEAELANEQQLYAKRPRIYRLNAASTMRDKGA WYKDEWRKKVERIGNLNYPDEARRQQIYGNLRLLVSINRDGTLYEVQVLESSGQPLLDQAAQRIVRLAAPFAPFTGDLNDVDRLEIIRTWKFAKGDRLSS N
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|