Pseudomonas trivialis IHBB745, AA957_RS14400 (gyrB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas trivialis strain IHBB745, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
AGTCTTTGAGCAGACCTTGAGTGAGTTGTTGGACCTCGAGGGCCTGACGCTGAGTTACTACCGTGGTTGGGACAAAGAGCGTGAGCTGAGCGCTGTGCTC GCGACGTCCTTGCAGCGGGATCAGCAAATCGGTCATACCCAGGCCGGACCCCAACGGGCTGATTTGCGTCTTAGATTAGGCGCTCACAATGCTGCGGACA TTTTGTCCCGTGGTCAGCAAAAGTTGGTGGTGTGTGCACTGCGGATCGCCCAAGGCCATTTGGTTAGCCAGGCCCGGCGCGGTCAGTGTATTTATCTGGT GGATGACTTGCCGTCCGAACTTGACGAGCAACATCGCCGCGCGTTATGCCGCTTGTTGGAAGAATTACGCTGCCAGGTGTTTATCACCTGTGTAGACCAC GAATTATTGAGGGAAGGCTGGCAGACGGAAACGCCAGTCGCTTTGTTCCACGTGGAACAAGGCCGTATCACCCAGACCCACGACCATCGGGAGTGAAGGC
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| DNA Sequence for Gene |
>AA957_RS14400
|gyrB
ATGAGCGAAGAAAACACGTACGACTCGACCAGCATTAAAGTGCTGAAAGGTTTGGATGCCGTACGCAAACGTCCCGGTATGTACATTGGCGACACTGATG ACGGTAGCGGTCTGCACCACATGGTGTTCGAGGTGGTCGACAACTCCATCGACGAAGCTCTGGCCGGTCACTGCGACGACATCAGCATCATCATCCACCC GGATGAGTCGATTACCGTACGCGACAACGGTCGCGGCATTCCGGTAGACGTGCACAAAGAAGAAGGCGTTTCGGCGGCAGAGGTCATCATGACTGTGCTC CACGCCGGCGGTAAGTTCGACGATAACTCCTATAAAGTCTCCGGTGGTTTGCACGGCGTAGGTGTGTCGGTCGTGAACGCGCTGTCCGAAGAGCTGATTC TGACTGTTCGCCGTAGCGGCAAGATCTGGGAACAGACCTACGTGCACGGTGTTCCACAAGAGCCGATGAAAATCGTCGGTGACAGCGAAACCACCGGTAC ACAGATCCACTTCAAACCGTCTGACGAAACCTTCAAGAATATCCACTTCAGCTGGGACATCCTGGCCAAGCGTATTCGCGAACTGTCCTTCCTCAACTCC GGCGTGGGTATCGTCCTCAAGGACGAGCGCAGCGGCAAGGAAGAGCTGTTCAAGTACGAAGGTGGCTTGCGCGCGTTCGTTGAATACCTGAACACCAACA AGACTGCGGTCAACCAGGTGTTCCACTTCAACATCCAGCGTGAAGACGGCATCGGCGTGGAAATCGCCCTGCAGTGGAACGACAGCTTCAACGAGAACCT GTTGTGCTTCACCAACAACATTCCACAGCGCGACGGCGGTACTCACTTGGTGGGTTTCCGTTCCGCACTGACGCGTAACCTCAACACCTACATCGAAGCC GAAGGCTTGGCCAAGAAGCATAAAGTCGCCACCACCGGTGACGATGCGCGCGAAGGCCTGACCGCGATCATTTCGGTGAAAGTGCCGGATCCCAAGTTCA GCTCCCAGACCAAAGACAAGCTGGTGTCTTCCGAAGTGAAGACCGCAGTGGAACAGGAGATGGGTAAGTACTTCTCCGACTTCCTGCTGGAGAACCCGAA CGAAGCCAAGCTGGTTGTCGGCAAAATGATCGATGCTGCACGCGCCCGTGAAGCCGCGCGTAAAGCCCGTGAGATGACCCGTCGTAAAGGTGCGCTGGAT ATCGCCGGCCTGCCGGGCAAATTGGCTGACTGCCAAGAGAAAGACCCTGCCCTTTCCGAACTGTACCTGGTGGAAGGTGACTCTGCTGGCGGCTCCGCCA AGCAGGGTCGTAACCGTCGCACCCAGGCTATCCTGCCGTTGAAGGGTAAGATCCTCAACGTCGAGAAGGCTCGCTTCGACAAGATGATTTCCTCTCAGGA AGTCGGCACCTTGATCACGGCGTTGGGCTGCGGTATCGGCCGTGACGAGTACAACATCGACAAGTTGCGTTACCACAACATCATCATCATGACCGATGCT GACGTCGACGGTTCTCACATCCGTACCTTGCTGCTGACCTTCTTCTTCCGTCAGTTGCCAGAGCTGATCGAGCGTGGCTACATCTACATCGCCCAGCCGC CGTTGTACAAAGTGAAAAAGGGCAAGCAAGAGCAATACATCAAAGACGACGACGCCATGGAAGAGTACATGACGCAGTCGGCTCTGGAAGATGCCAGCTT GCACCTGAACGATGAAGCCCCGGGCATCTCCGGTGAGGCGCTGGAGCGTCTGGTTAACGACTTCCGCATGGTGATGAAGACCCTCAAGCGTTTGTCGCGC CTGTACCCTCAGGAACTGACCGAGCACTTCATCTATCTGCCAGCCGTGAGCCTGGAACAGTTGGGCGATCATGCACACATGCAGGATTGGCTGGCCCAGT ACGAAGTGCGCCTGCGTACCGTTGAGAAGTCTGGCCTGGTGTACAAAGCCAGCCTGCGTGAAGACCGTGAACGTAACGTGTGGCTGCCAGAGGTCGAACT GATCTCCCACGGCCTTTCCAACTACGTCACCTTCAACCGCGACTTCTTCGGCAGCAATGACTACAAGACCGTGGTTACCCTGGGCGCGCAGCTGAGCACC CTGCTGGATGACGGCGCGTATATTCAGCGTGGCGAACGCAAGAAGCAGGTCAAGGAATTCAAGGAAGCCCTTGATTGGCTGATGGCTGAAAGCACCAAGC GTCATACCATCCAGCGCTATAAAGGTCTGGGCGAAATGAACCCGGATCAGCTGTGGGAAACCACCATGGACCCAGCCCAGCGCCGCATGCTGCGTGTGAC CATCGAAGACGCCATTGGCGCAGACCAGATCTTCAACACCCTGATGGGTGATGCGGTCGAACCTCGTCGTGACTTCATCGAGAGCAATGCTTTGGCGGTT TCTAACCTGGACTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCCAGATAATCGCAAACACAAAAAAGGCCAACGCTTAGCGTTGGCCTTTTTTATTGAGTGCAGCTCGGTGACTTTCCAAATGCTCCACGTGGAACATCAA ATTTTTCAGTCTTGAGACGCCGCCGCCACACTCTCCAACCGATACCCATACCCATAGATCGTCAGTAACTGCCAACCCCGGTCTGCGGTCAGCCCCAGCT TGTTGCGCAGCCGATAGATATGCGTATCAAGCGGCCGCGACGAGACCATTTCTTCATGGGTCCAGAACCGCTCGTAGAGATACTCCCGGGACAGTGGCCG CGCCAGGTTGGCAAACAAGCAGCTAGCCAGACGGTACTCACGTTCGGTGAGGTTGATCGGTTTACCCGCGCGCGTCACGGTCAGTTCGGCGTCGTCAAAG GTAAGGTCATTAAAACTCTGTACTTCGTGAGTCGCTGACTTCTGCAGGCCATGGCGACGTAGCACCGCGGTGACCCGTGCTTTCAGTTCATTCGGGCGAA
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| Amino Acid Sequence |
>DNA gyrase subunit B
MSEENTYDSTSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGHCDDISIIIHPDESITVRDNGRGIPVDVHKEEGVSAAEVIMTVL HAGGKFDDNSYKVSGGLHGVGVSVVNALSEELILTVRRSGKIWEQTYVHGVPQEPMKIVGDSETTGTQIHFKPSDETFKNIHFSWDILAKRIRELSFLNS GVGIVLKDERSGKEELFKYEGGLRAFVEYLNTNKTAVNQVFHFNIQREDGIGVEIALQWNDSFNENLLCFTNNIPQRDGGTHLVGFRSALTRNLNTYIEA EGLAKKHKVATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFSDFLLENPNEAKLVVGKMIDAARAREAARKAREMTRRKGALD IAGLPGKLADCQEKDPALSELYLVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMISSQEVGTLITALGCGIGRDEYNIDKLRYHNIIIMTDA DVDGSHIRTLLLTFFFRQLPELIERGYIYIAQPPLYKVKKGKQEQYIKDDDAMEEYMTQSALEDASLHLNDEAPGISGEALERLVNDFRMVMKTLKRLSR LYPQELTEHFIYLPAVSLEQLGDHAHMQDWLAQYEVRLRTVEKSGLVYKASLREDRERNVWLPEVELISHGLSNYVTFNRDFFGSNDYKTVVTLGAQLST LLDDGAYIQRGERKKQVKEFKEALDWLMAESTKRHTIQRYKGLGEMNPDQLWETTMDPAQRRMLRVTIEDAIGADQIFNTLMGDAVEPRRDFIESNALAV SNLDF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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