Pseudomonas trivialis IHBB745, AA957_RS14340
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas trivialis strain IHBB745, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
ATGCTGCTGAAAGTCACCACCCCGATCACCGCCCAAGACACCGGCGGCAGCCTGCACGACCGCCTTGCCGAGCTGGGCCCGCCCGCCGTGATCCAGGCCA TCGCCGGCCTGGCTGCCGGCACCCTGGAAGGCGACGTGCAGGACGACAGTCTGGCCACCTACGCCCACAAACTGAACAAAGACGAAGCGCGCATCGACTG GAGCCGCCCGGCCGTGGAGCTGGAACGTCTGGTACGCGCCTTCAACCCATGGCCGATCTGCCACAGCACCCTTAACGGCGAAGCCTTGAAAGTACTGGCC GCGACCCTGGCCGAGGGCACAGGCGCGCCGGGTGAAATCATCGGCGCCAGCAAAGACGGCCTGTTGGTGGCGTGCGGCGAACAGGCGCTGTGCCTGACCC GTCTGCAATTGCCCGGCGGCAAGGCGCTTAATTTCAGCGATTTGTTCAACAGCCGTCGTGAGAAGTTTGCCCTGGGCACTGTTCTCGGGGTGGTCGCCCA
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| DNA Sequence for Gene |
>AA957_RS14340
ATGAACCCGCGTCTGGCCGCCGCCAAGGCCCTTGCCGCCGTGCTCAACGGCAAGGCATCGCTGAACAGTTCGCTGCCCACGCAGATGGATAAGGTCGAAG ACCGTGATCGCGGCTTCACCCAGGACCTGGCCTTTGGCACCGCCCGCTGGCAGCCACGCTTGTCGGCACTGGTAGCCAAGTTGCTGCAGAAGCCGTTCAA GGCGGCCGATGCTGATGTCGAAGCGCTGCTGCTGGTCGGCCTCTATCAACTGCTCTACACCCGCGTACCCGCTCACGCCGCCATCGGCGAGACGGTCGGT TGCGCCGACAAGCTGAAAAAGCCTTGGGCCAAGGCCCTGCTCAATGCCGTGCTGCGCCGCGCCCAGCGCGAAAGCGAAGCGCTGCTGGCTGAGCTGGAAC ATGACCCGGTGGTGCGCACTGCCCATCCGCGCTGGCTGCAAAAGTCCCTGAAGGCATTCTGGCCCGAGCAATGGGAAGCCATTTGCGCGGCCAACAATGC GCACCCGCCGATGATCCTGCGGGTCAACCGTCGTCATCACAGTCGCGACGCCTACCTGCAATTGCTCACCGACGCCGGCATCAACGCCACGCCGTGCGTG TACAGCGTCGACGGTATCGTGCTCGAAGCGGCCGCCGATGTGCGCAGCCTGCCGGGCTTTGCCGAAGGCTGGATCAGCGTGCAGGATGAAGCCGCGCAAT TGGCTGCCGACCTGCTCGACCTGGCGCCCGGCCAACGCGTGCTCGACGCCTGCTGCGCACCTGGCGGTAAGACTTGTCACATCCTGGAGGTCGAAAAAGA CCTCGCTGGTGTAGTCGCTGTCGACCTCGAAGCCAAGCGCTTGGTGCGCGTACGGGAAAACCTCGCACGCCTGGGCCTCAGCGCCGAGCTGATCGCTGCC GATGGCCGTGAAACCGCCACCTGGTGGGACGGCAAACCGTTCCAGCGCATCCTGCTCGATGCGCCGTGCTCCGCCACCGGTGTGATCCGCCGTCACCCGG ACATCAAGCTCACGCGCCAACCCGACGACATCGCCGCCCTGGCCGTGCTGCAAGGCGAGCTGCTCGACGCGCTGTGGCCGACCCTGGAAGTCGGCGGCAT CCTGCTCTATGCCACGTGCTCCACCTTGCCGACTGAAAACACCGAGGTGATCGAAGCCTTCCTCGCCCGCACCAGCGGCGCCCGGGAGCTGGACCTCGCC ACAACCGCCGGCATCAAGCAGCCCCACGGTCGCCAACTGCTGGCGCAAGAAGGCGGACACGATGGCTTCTACTACGCCAAACTGATCAAGATTGCCGCCG CGCGCGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ATGGTTTTAAGGGAGTGACCGGATGAAAATCATCATCCTTGGAGCAGGGCAGGTCGGCGGCACGCTGGCCGAACATTTGGCCAGCGAAGCCAACGACATC ACCGTGGTCGACACCGACGCCGAGCGCCTGCGCAACCTCGGCGACCGCCTCGACATCCGCACCGTACAAGGCCGCGCGTCGTTCCCGACGGTGCTGCGCC AGGCCGGTGCCGATGACGCCGATATGCTGGTGGCCGTGACCAACAGCGACGAAACCAACATGGTCGCCTGCCAGGTCGCCCACACCCTGTTCCACACCCC GACCAAAATCGCCCGTGTGCGCGAAGCGGCCTACCTGACCCGCGCCGGTTTGTTCGACAACGACGCGATTCCGGTGGACGTATTGATCAGCCCGGAACAG GTGGTCACCCACTACATCAAGCGCCTGATCGAGATTCCGGGCGCCTTGCAGGTGATCGACTTTGCTGGCGGCAAGGCGCAACTGGTCGCGGTGAAGGCCT
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| Amino Acid Sequence |
>16S rRNA methyltransferase
MNPRLAAAKALAAVLNGKASLNSSLPTQMDKVEDRDRGFTQDLAFGTARWQPRLSALVAKLLQKPFKAADADVEALLLVGLYQLLYTRVPAHAAIGETVG CADKLKKPWAKALLNAVLRRAQRESEALLAELEHDPVVRTAHPRWLQKSLKAFWPEQWEAICAANNAHPPMILRVNRRHHSRDAYLQLLTDAGINATPCV YSVDGIVLEAAADVRSLPGFAEGWISVQDEAAQLAADLLDLAPGQRVLDACCAPGGKTCHILEVEKDLAGVVAVDLEAKRLVRVRENLARLGLSAELIAA DGRETATWWDGKPFQRILLDAPCSATGVIRRHPDIKLTRQPDDIAALAVLQGELLDALWPTLEVGGILLYATCSTLPTENTEVIEAFLARTSGARELDLA TTAGIKQPHGRQLLAQEGGHDGFYYAKLIKIAAARG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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