Pseudomonas trivialis IHBB745, AA957_RS13855
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas trivialis strain IHBB745, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
ACTCGTTGATCGGCACCATCACCAGTGAAGACTGCACACTCATCATCGAACGGTAGCCAGAGTCGACACGCTCCACCTCACGCGCAATCAAGCCATAGCA GACGTAGTTCAAACCGCTGCCACCGTACTGCTCGGGAATCATCGCGCCGAGCAGCCCGGTCTCACCCATCTCGCGAAAAATCGCCGGGTCGGTCTTTTCA TGGCGAAAGGCTTCGAGCACACGGGGCGCCAACTTGTCCTGGGCGAATTGCTCAGCACTGTCGCGCACCATGCGCTCTTCTTCGGTGAGCTGTTGATCGA GCAGCAGTGGATCGATCCAGTTGAAGCTTGCCTTGCCAGCCATGAATAAGTCCTCGCGGAGAAAATCGGAAGTCGTGGAAGGAGCCTAGGCCTGCCAGGC GCGTAGGGCAAACGAGGTTTCCGCATAGGGTTGTGCTAATTTCTCACTTCGTAACGATTGAGAAGGGCGCATCAGCGCTTTATGAGTGAGGACACGGTAT
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| DNA Sequence for Gene |
>AA957_RS13855
ATGCGCAGAAAAATTCCCAGCACCACCGCCCTGGTCAGTTTTGAAGTAGCAGCCCGCCACGAGAGCTTCACCAAGGCGGCGCACGAACTTTCGATCACTC AAGGCGCCATCTGTCGACAGATCGCCAGCCTTGAGGAGTTTTTGAGTGTCGAGCTGTTTCGGCGCTCACGGCGCGGGGTCAAGCTGACGGAAGCGGGGCT TTCCTACAGCCGTCGCGTTGCCACACAGTTGGACGCAGTGGAGCGCGATACGCTTTCGGTGATGGGACAGCAGGGCGCCAACGTCATCGAGCTGGCCGTG GTCCCGACGTTTGGCACTCAATGGTTGATACCTCGCCTCAAGGACTTTCAACGCCAGCACCCGGAGGTCACCGTCAACCTGACCAACCGCACGCGCCCCT TTCTGTTTGCCGATACCGAGTTCGACGCCGCCATCTACTTCGGCGATGCTGACTGGTCCGGCACCGAATCCCATCGACTGATGGGTGAAAATCCTGTCCC GGTGTGCAGCCCACGGCTTTTGGCTAACCGCACGCAGTTCAGCACTCAGGAAATTGCAGCGCTGCCGCTCCTGCAGCAGACCACTCGACCTTACGCGTGG CGCCAGTGGTTCAACGCCCAACAGCTGAACATCCCCCGCGACATGACAGGCCCGCGTTACGAGCTATTCTCGATGTTGTCTCAGGCAGCCATGCATGACA TGGGAATCGCGCTGATCCCGCCGTTCCTCATCCAGCGCGAACTGGAGGAGGGTCATCTGGTGATTGCAAACCGCGAGACGTTGACCAGCTCAAAGGCCTA CTACCTGATGATTCCTGAGAGAAAAGTAGAATCTGTCTCACTGCACGCATTCAGGGACTGGTTGATTGACCAATCACAACGCTACAGCCCCAGTATTTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGGGTATAGCAGTATTGCTGACTCTGTAGTCAGCTAATTTAAAAGCCTACAGATATACATATATGTCGCATTTCAACAGACTGTATCTGTTAGCCAAAAA TCAGGCTAAAAGCCATGATCTACATGGCTTGTAGCGACTATCACAAGCCAATGGCCGACTATTCACACGAACCATTGAAAAATACTGCAAAAACGCCTGA AGCCCTTTAAGCCCATGTATTTGAAGAGGTTATTTCAGCTTGTTGCGACAATCAGTCACAGGGTGACTTGTAGTTAATTTTTCGTCACACGTCATAATCC CTTGAAGGCCGTAAAGTTCGCCTGCAAAATGCCGCGCCCCGCTGTCATTTCAGCGGGATCGTGCTGATCGGCCGCCCCAGCTGCGCCACTCGCGGTGCAC TGGCCTTTTTACAAAAAGATCAAAAGCAAAAAGATCATGCAGGAGATTTGACGTGCACATTGGTGTTCCTCTCGAAACCCAGACCGGTGAAACGCGGGTG
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| Amino Acid Sequence |
>LysR family transcriptional regulator
MRRKIPSTTALVSFEVAARHESFTKAAHELSITQGAICRQIASLEEFLSVELFRRSRRGVKLTEAGLSYSRRVATQLDAVERDTLSVMGQQGANVIELAV VPTFGTQWLIPRLKDFQRQHPEVTVNLTNRTRPFLFADTEFDAAIYFGDADWSGTESHRLMGENPVPVCSPRLLANRTQFSTQEIAALPLLQQTTRPYAW RQWFNAQQLNIPRDMTGPRYELFSMLSQAAMHDMGIALIPPFLIQRELEEGHLVIANRETLTSSKAYYLMIPERKVESVSLHAFRDWLIDQSQRYSPSI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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