Pseudomonas trivialis IHBB745, AA957_RS12990

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0009225 nucleotide-sugar metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01181
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008460 dTDP-glucose 4,6-dehydratase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01181
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG ptv00523 Polyketide sugar unit biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ptv00525 Acarbose and validamycin biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ptv00521 Streptomycin biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ptv01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ptv01130 Biosynthesis of antibiotics 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF16363 GDP-mannose 4,6 dehydratase IPR016040 NAD(P)-binding domain 4 326 1.5E-96
Gene3D G3DSA:3.40.50.720 - - - 2 324 0.0
CDD cd05246 dTDP_GD_SDR_e IPR005888 dTDP-glucose 4,6-dehydratase 1 333 0.0
SUPERFAMILY SSF51735 NAD(P)-binding Rossmann-fold domains IPR036291 NAD(P)-binding domain superfamily 1 345 2.47E-93
NCBIfam TIGR01181 JCVI: dTDP-glucose 4,6-dehydratase IPR005888 dTDP-glucose 4,6-dehydratase 2 339 0.0
Gene3D G3DSA:3.90.25.10 - - - 200 333 0.0
PANTHER PTHR43000 DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATED - - 2 341 2.0E-114

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.