Strain | Pseudomonas trivialis strain IHBB745, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
AGCCCGCAATGGTTTCAGGGCTTGCTCGAGGAGCTCAAGGCGCTCGGTTTGAAAGTCGCCCTGGACACCAGCGGCGAAGCGCTGCGCGCCGGCTTGAAGG CTGGCCCGTGGATGGTCAAACCCAACACCGAAGAACTGGCCGAAGCCTTGGGAAATGCCACGGACGCAATCAGTCAGTTGCATCAACAGGGCGTGGAACA TGTGGTGGTTTCTGACGGCGCCGCCGGCGTGAGTTGGTACAGCCCGGCCGGGGCACTGCATGCCACGCCGCCACAGGTGACGGTCGCGAGTACCGTCGGC GCTGGCGACTCGCTGCTGGCCGGGATGCTGCACGGTGTGCTCAATGGCGATACGCCGGAGCAAACCCTGCGCCGGGCCACGGCGATTGCCGCGATGGCTG TCACGCAGATTGGTTTTGGCATCAGCGATCACGCGCAGTTGGCGCGTCTCGAAAGCGGCGTACACGTACGCCCGCTGACAGAACAATAAGAGGGTTTGTG
|
|
DNA Sequence for Gene |
>AA957_RS09950
ATGAAGTTAGCCATTGTTACTGCCTGCCCGAACGGCATGGTCACCAGTGTGCTGTGCGCCCGCTTGTTGGACGCTGCCGCGCAGCGCCAGGGCTGGAGCA CCAGCGTTGAGGTGGTGGATGTACAGCGTCCGGAACGCCAGTTGTCCCAGGCCACCATTGATGACGCTGAGTGGGTGTTGCTGGTCAGCAGCACCCCCGT CGACATGCAGCGGTTTGTCGGCAAGCGCGTGTTCCAGAGCACGCCGGCCCAGGCGCTGGCGGATGTCGACGCCGTGTTGCGTCGCGGCGCTGAAGAGGCG CAGGTCTACGTCGCGGCTGCCGCTGTAGCCAAAAATGCACCGCGCATCGTTGCGATTACTGCCTGCCCAACGGGCGTCGCCCACACCTTTATGGCCGCCG AAGCCTTGCAGCAGACGGCCAAGCGTTTGGGTTATGACTTGCAAGTCGAGACCCAGGGTTCGGTCGGCGCACGCACGCCCTTGAGCCCCGAGGCTATCGC CAACGCGGATGTTGTGCTGCTGGCGGCCGATATTGAAGTGGCCACCGAGCGCTTCGCCGGCAAGAAGATCTACCGCTGCGGCACCGGCATTGCCCTCAAG CAATCCGAAGCCATCCTCAACAAGGCCCTCGCTGAAGGTGCCGTGGAAAGCGCGGCCAGCGGCGCGGTGGCCAAGAAAGAAAAAACCGGCGTGTACAAAC ATTTGCTGACCGGTGTGTCATTCATGTTGCCGATGGTGGTGGCAGGCGGGTTGTTGATTGCGTTGTCGTTTGTGTTCGGTATTCACGCGTTTGAACAAGA GGGCACCCTCGCCGCGGCGCTAAAAACCGTCGGCGATCGCGCCTTCATGCTGATGGTGCCGCTGCTGGCGGGTTACATCGCCTACTCGATTGCCGACCGT CCTGGCATTGCGCCGGGCATGATCGGCGGCCTGTTGGCGGGCACCCTGGGCGCGGGCTTTATCGGCGGCATCCTCGCCGGTTTCCTTGCCGGCTACTGCG TCAAGTTCATCTCGCGTGCGGTGCAATTGCCGCAAAGCCTGGAAGCACTCAAGCCGATCCTGATCATCCCGTTGCTGGCGAGCCTGTTTACCGGCCTGGC GATGATCTACCTGGTGGGCCCACCGGTGGCGCGTCTGCTCACGGGCCTTACTGACTTCCTCAGCACCATGGGCACCACCAATGCGGTGCTGCTGGGCATC CTGCTGGGCGGCATGATGTGCGTCGACCTCGGCGGGCCGATCAACAAGGCGGCGTATGCGTTTTCGGTCGGCTTGCTGGCGGCGTCCAGCGGTGCACCGA TGGCCGCGACCATGGCCGCCGGCATGGTGCCGCCCATCGGCATGGGCATCGCTACGTTCCTGGCGCGACGCAAGTTTGCCCAGGCTGAACGCGAAGCCGG CAAGGCGGCGATGATCCTCGGCATGTGCTTTATCTCGGAAGGCGCGATCCCGTTTGCCGCCAAGGACCCGCTGCGCGTGATCCCGGCCAGCATCGCCGGC GGCGCCTTGACCGGCGCGCTGTCGATGTACTTCGGCTGCAAACTGGCGGCGCCCCATGGTGGTTTGTTTGTGCTGGTCATCCCGAATGCGATGAACCATG CGCTGCTGTATCTGCTGGCGATTGTTGCGGGTAGTGTGTTGACCGGTTTGGTCTACGCGTTGATCAAACGTCCTGAAGCGGTCGAACTGGAGATGACACC TGCCAAGGCCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
CACGGTTTAAAAGTGTGGGAGCTGGCTTGCCTGCGATAGCGGTGGGTCAGCTTGCAAATTTGTTACTGATACACCGCTATCGCAGGCAAGCCAGCTCCCA CATTTGATCTTCATTGTCTGTGGGGCTGGTGTCATATCTGCTTCATGCCGCCGTGGTTTAGTTTCCCTTTTGATCCTCAAGAGGGCACCTGCATGAGCCA TTTCGATCTCGGCCGCCGCCGCGTGATGCAAGCTGTCGGCGCGGGGCTGTTGTTGCCGGGCCTGGCGCCGGCAGTGATCGCCTCTGTGAAGGACCGCCCG CAACTCACTGACGGTGTGCAGTCCGGCGACCTGCTCGGCGACCGCGCGATGATCTGGAGCCGCAGCGACCGCCCCGCGCGCATGGTGGTGGAGTGGGACA CCCGCAGCGTGTTCAGCAACCCGCGCAAATTCATCTCTCCGCTGGCCGACAACCGCACAGACTTTACCGCCCGCGTCGAACTCACCGGGCTGCCCGCTGA
|
|
Amino Acid Sequence |
>FruA
MKLAIVTACPNGMVTSVLCARLLDAAAQRQGWSTSVEVVDVQRPERQLSQATIDDAEWVLLVSSTPVDMQRFVGKRVFQSTPAQALADVDAVLRRGAEEA QVYVAAAAVAKNAPRIVAITACPTGVAHTFMAAEALQQTAKRLGYDLQVETQGSVGARTPLSPEAIANADVVLLAADIEVATERFAGKKIYRCGTGIALK QSEAILNKALAEGAVESAASGAVAKKEKTGVYKHLLTGVSFMLPMVVAGGLLIALSFVFGIHAFEQEGTLAAALKTVGDRAFMLMVPLLAGYIAYSIADR PGIAPGMIGGLLAGTLGAGFIGGILAGFLAGYCVKFISRAVQLPQSLEALKPILIIPLLASLFTGLAMIYLVGPPVARLLTGLTDFLSTMGTTNAVLLGI LLGGMMCVDLGGPINKAAYAFSVGLLAASSGAPMAATMAAGMVPPIGMGIATFLARRKFAQAEREAGKAAMILGMCFISEGAIPFAAKDPLRVIPASIAG GALTGALSMYFGCKLAAPHGGLFVLVIPNAMNHALLYLLAIVAGSVLTGLVYALIKRPEAVELEMTPAKA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|