Pseudomonas trivialis IHBB745, AA957_RS08340

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00158
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00158
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008134 transcription factor binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00158
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00382
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00448
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0043565 sequence-specific DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01590
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG ptv02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR32071 TRANSCRIPTIONAL REGULATORY PROTEIN - - 13 448 0.0
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 14 122 5.6E-26
FunFam G3DSA:3.40.50.2300:FF:000018 DNA-binding transcriptional regulator NtrC - - 10 140 1.2E-39
FunFam G3DSA:3.40.50.300:FF:000006 DNA-binding transcriptional regulator NtrC - - 145 323 3.6E-72
SUPERFAMILY SSF46689 Homeodomain-like IPR009057 Homeobox-like domain superfamily 364 447 8.06E-11
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 173 316 4.8E-10
Gene3D G3DSA:3.40.50.2300 - - - 9 144 8.8E-31
CDD cd00009 AAA - - 158 317 2.61399E-21
CDD cd17549 REC_DctD-like - - 14 143 5.58113E-67
PRINTS PR01590 FIS bacterial regulatory protein HTH signature IPR002197 DNA binding HTH domain, Fis-type 428 448 1.2E-9
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 12 123 2.9E-30
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 153 382 3.84E-68
Gene3D G3DSA:1.10.10.60 - - - 397 449 7.2E-14
Gene3D G3DSA:1.10.8.60 - - - 324 393 7.3E-22
Pfam PF02954 Bacterial regulatory protein, Fis family IPR002197 DNA binding HTH domain, Fis-type 405 445 1.2E-9
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 11 198 9.53E-43
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 145 323 3.0E-63
PRINTS PR01590 FIS bacterial regulatory protein HTH signature IPR002197 DNA binding HTH domain, Fis-type 411 428 1.2E-9
Pfam PF00158 Sigma-54 interaction domain IPR002078 RNA polymerase sigma factor 54 interaction domain 153 319 2.1E-66

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.