Pseudomonas trivialis IHBB745, AA957_RS08050

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas trivialis strain IHBB745, complete genome. [Details]
DNA Sequence Upstream of Gene
TTGTCGAACGCGCCGTGGCACAACCGCACATTCGCCTGGTCACCGGCGGCAAGGCGGTGGAAGGCAATGGTTTCTTCTTTGAGCCGACCGTGCTGGCCGA CGCGCAGCAGGACGATGAGATCGTGCGCCGCGAGGTATTCGGGCCGGTGGTGTCGGTGACCAAGTTCACCGATGAAGCGCAGGTGCTGGGCTGGGCCAAC GATTCGGACTACGGCCTGGCGTCGTCCGTATGGACCGCCGATGTAGGACGCGCCCATCGTTTGGCCGCGCGCTTGCAGTACGGCTGCACCTGGGTGAACA CCCACTTCATGCTCGTCAGCGAAATGCCTCACGGCGGTCAGAAACTGTCCGGCTACGGCAAGGACATGTCCATGTACGGGCTGGAGGACTACACCACCGT TCGCCATGTGATGTTCAAGCACTGATGCTGTGCCCCCTGTGGGAGCGGGCTTGCTCCCACACGGGATCTCCTTATAACAATAAATAATTCGCAGGTTCCC
DNA Sequence for Gene
>AA957_RS08050
ATGGATATCACCCGCCGCGACTTCCTCAACGGCGTCGCTGTCACCATTGCTGCTGGCATGACCCCGCTGCAATTGCTTCAAGCCGCCCCCGATGGTCGTT ACTACCCACCCGCGCTTACCGGCTTGCGCGGCAGCCATGTCGGCTCGTTTGAAGTGGCGCACCAGATGGGCTGGGAAAAGAAGGTGTTCGACACCGAAAA ACTACCGATCACCGAGGATTACGACCTGGTGGTCGTGGGTGGCGGCTTGAGTGGTTTGTCGGCGGCGTGGTTCTACCGCGAGAAGCACCCAAAGGCGAAG ATCCTGATCCTGGAAAACCACGACGACTTCGGCGGCCACGCCAAGCGCAACGAGTTCCAGGCCGGTGGCCGCATGATCATCGGCTACGGTGGCAGCGAGG CGTTCCAGTCGCCCAACCACCTTTACAGCAAGCACGTGAACGGGCTGTTGAAAAAGCTCGGGGTGAACATCAAGCGCTTCGAAACCGCCTTCGACCGCCA GTTCTACCCTGGGCTCGGCCTGTCGCGCGGGGTGTTTTTCGACAAGGAAAACTTCGGCGAAGACAAACTGGTGACCGGCGACCCAACACCGATGGTGGCC GATGACATCGCCCCGGACAAACTGAATGCGCGCGCCATCAGCGATTTCATCAATGATTTTCCGTTGCCAGCCGCGGACCGCCTGGCCCTGATCGAGCTGC ACACAGCGCCCAGGGATTACCTGCCGGGCAAGACCACCAAAGAAAAAGCCGCCTACCTGGCAGCCACCAGCTACCGGGATTTTTTACGCAAGAACGTAGG ACTTTCCGAAGGCGCGGTGAAGTACTTCCAGAGCCGCACCAATGACTTCATGGCCCTGAGCATTGATGCGGTGGCATCGTCCGACGCTTATAACGTGGGT TTCCCTGGCTTTGCCGGGATGAACCTGGCGCCGATCAGTGAAGAAGCAGCGGCGGAAATGGAAGAGCCCTACATCTACCACTTCCCGGATGGCAATGCGT CGGTGGCGCGGTTGCTGGTGCGCAGCCTGATCCCGGGTGTGGCGCCGGGGCATACCATGGACGATATCGTGCTGGCGGCCTTTGATTACGCCAAGCTCGA CCAACCCAAGGCGGCGGTGCGGCTGCGTTTGAACAGCACGGCGGTGAGCGTGCGTAACGTCGGTGACGGCGTGCACATCGGCTACAGCCGTGGCGGACAA CTCGCACAGGTGCGCGGCAAACGCTGCATCCTGGCCTGCTACAACATGATGATTCCTAACCTGTTGAAGGACCTGCCGGCGCCCCAAGCCCATGCTCTGA GCCAGAACGTCAAATACCCGCTGGTGTACACCAAAGTGGTGATCCGCAACTGGCAGTCGTTCCAGAAACTGGGCGTGCACGAGATTTACGCAGCGACCCA GCCTTACAGCCGGATCAAGCTGGACTACCCCGTGAGCATGGGCGGCTACGACCACCCGCGCGACCCGACGCAGCCGATTGGCTTGCATATGGTCTACGTG CCCACCAGCCCCAACAGCGGCATGAACGCCCGCGACCAGGCACGCGCCGGGCGGGGCAAGTTGTATGGGCAGACGTTCGAGCAACTGGAAGCGCAGTTGC GTGACCAACTGCAACGCATGCTTGGGCCGGGTGGGTTCAACCACCAGACCGATATTCTGGCGATCACTGTCAACCGCTGGTCACATGGTTATGCGAGCTT CTCCAACAGCTTGTTTGATGATGCCGATGAGAACGAAGCGTGGATGAACCTGGCGAGGAAGCCGGTGGGGCATGTGAGCATTGCCAATTCGGACGCCGCG TGGAGTGCGTATGCGCATGCGGCGATTGATGAGGCGTATCGGGCGGTGGGTGAAGTGGCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AATACTCTTTAGATGTGGGAGCTGGCTTGCCTGCGATAACGCTACGTCAGTCACTGCAACAGTGACTGACAGACCGCTATCGCAGGCAAGCCAGCTCCCA CATTGGATCTTCACAATTCCTGAGTAGCGTGGTTACCCAAGCCCCCGGAAATGTCTTGTTTCATATGCAACGCCATCACCCCGCTATCAATCAATTTTCC TACGTCATCGAACCGCTTAAGCTATCCGGCGTCTGTTTAATGTCCGTTGCGTTTGGCCGAAGGCATGTCCGAACCGTAATTTCTGATCCGCAACGTGCCA GGAACGGCGCGGGATTTGCTCACGACAGGTTGTCTCTATGCACCGCAGGAATTTGCTCAAAGCGTCCATGGCCATTGCGGCTTACACCGGTTTGTCGGCC AGCGGCCTGCTTGCCGCCCAGGCCTGGGCCGGGAACCGTGCCGCCGATGGCAAGGCCGTGGCGTTCGATTTCGAATCGCTGAAAGCCCAGGCCAAGCAAC
Amino Acid Sequence
>spermidine dehydrogenase
MDITRRDFLNGVAVTIAAGMTPLQLLQAAPDGRYYPPALTGLRGSHVGSFEVAHQMGWEKKVFDTEKLPITEDYDLVVVGGGLSGLSAAWFYREKHPKAK ILILENHDDFGGHAKRNEFQAGGRMIIGYGGSEAFQSPNHLYSKHVNGLLKKLGVNIKRFETAFDRQFYPGLGLSRGVFFDKENFGEDKLVTGDPTPMVA DDIAPDKLNARAISDFINDFPLPAADRLALIELHTAPRDYLPGKTTKEKAAYLAATSYRDFLRKNVGLSEGAVKYFQSRTNDFMALSIDAVASSDAYNVG FPGFAGMNLAPISEEAAAEMEEPYIYHFPDGNASVARLLVRSLIPGVAPGHTMDDIVLAAFDYAKLDQPKAAVRLRLNSTAVSVRNVGDGVHIGYSRGGQ LAQVRGKRCILACYNMMIPNLLKDLPAPQAHALSQNVKYPLVYTKVVIRNWQSFQKLGVHEIYAATQPYSRIKLDYPVSMGGYDHPRDPTQPIGLHMVYV PTSPNSGMNARDQARAGRGKLYGQTFEQLEAQLRDQLQRMLGPGGFNHQTDILAITVNRWSHGYASFSNSLFDDADENEAWMNLARKPVGHVSIANSDAA WSAYAHAAIDEAYRAVGEVA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site