Pseudomonas trivialis IHBB745, AA957_RS07220
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas trivialis strain IHBB745, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CTCGTGGTGTTCCTGTGCCTGGCGGCACTGTACGAAAGCTGGTCGATCCCGATCGCGGTGGTGCTCGTAGTGCCGCTGGGCGTGGTGGGTGCGTTGATCG CTACCAGCATGCGCGGGTTGTCCAACGACGTGTTCTTCCAGGTGGGCCTGTTGGTGACGGTGGGCCTGGCGGCGAAAAACGCCATCCTGATCGTGGAGTT CGCCAAAGAGCTTCACGAACAGGGCAAAGGCATCGTCGAGGCGGCTATCGAAGCGTCCCGTATGCGTCTGCGTCCGATCATCATGACCTCCATGGCGTTC ATCCTCGGCGTACTGCCGCTGGCGATCTCCTCGGGCGCCGGTTCAGGCAGCCAGCACGCGATCGGTACCGGTGTAATTGGCGGTATGATCACGGCCACTG TGCTGGCGATCTTCTGGGTGCCATTGTTCTTCGCAACCGTATCCGCCGCTGGCGAACGTAAAAAGACTGACACAACTGAAACCCCTAAAGAGGCTGGCCA
|
|
| DNA Sequence for Gene |
>AA957_RS07220
ATGAGCAAGTCGCTACTTTCCCTAGCCGTCACGGCATTCGTGCTCAGTGGCTGCTCGCTGATACCTGACTATCAGCGTCCCGAAGCGCCGGTGGCTGCAC AGTTCCCGCAGGGGCCGGCGTACTCGTCGGCCCAGGCGCCGAGCCAGGCCGCTGTCGAACAGGGCTGGAAGCAGTTTTTCCATGACCCTGCCCTGCAGCA GTTGATCCAGACCGCGCTGGTGAACAACCGTGACCTGCGCGTTGCGGCCCTGAACATCGACGCCTACGCGGCGCAGTACAGCATCCAGCGTGCCGACCTG TTCCCGGCCGTGTCGGCCACGGGCAGCGGCAGTCGCCAGCGTGTGCCGGCGCGTGCCTCGCAGACCGGCGAAGCGAACATCACCAGCCAATACTCGGCCA CCCTTGGGATCAGCTCGTATGAGCTGGACCTGTTCGGTCGCGTACGCAGCCTGAGTGAAGAAGCGCTGCAGAAGTACTTCGCCACCGAAGAAGCACGCCG CAGCACCCAGATCAGCCTGGTGGCCAGCGTAGCCAATGCCTACCTGACCTGGCAGGCCGATAAGGAACTGCTCAAGCTGACCCAGGACACCCTTGGCGCG TTCGAGCAGAGCTTCAAGCTCACCTCGCGCAGCAACGAAGTCGGCGTGGCCTCGGCCCTCGACCTGAGCCAGGCACGCACCTCGGTGGAAAACGCCCGCG TGCAGCTTGCCCGGTATACGCGCCAGGTGGCCCAGGACGAAAACAACCTGACCCTGCTGCTGGGCACTGGCCTGCCGGCGAATATCGCCAGCAAGCCGCT GTCGGATGACCTGCTCAGCGAAGTGCCGGCCGGGTTGCCCTCGGACCTGCTGAAACGTCGCCCAGACATCCTGCAGGCCGAGTACAACCTCAAGGCGGCC AACGCCAACATCGGCGCTGCCCGTGCGGCGTTCTTCCCGAGCATCAGCTTGACGGCCAACGCCGGCACCCTGAGCCCGGACCTCGGTGGCCTGTTCAAAG GCGGCTCGGGCACCTGGTCGTTCGCCCCACAGATCAACATCCCGATCTTCAACGCCGGCAGCCTGCGCGCCAGCCTGGACTACTCGAAGATCCAGAAAGA GATCAATGTGGCGAACTACGAGAAGGCGATCCAGACCGGCTTCCAGGAAGTGTCCGACGGCCTCGCCGCGCGTGAGACCTACAAGCAGCAACTGGAGGCC CAGCGTGGCTTCGTCGCGGCCAACCAGGACTACTACCGCCTGGCCGAGCGTCGCTACCGCATTGGTGTCGACAGCAACCTGACGTTCCTCGACGCCCAGC GCCAACTGTTCAGTGCCCAGCAGTCGCTGATCACCGACCGCCTGGCGCAGTTGAACAGCGAGGTCAACCTGTACAAGGCCCTCGGTGGTGGCTGGAGCGA GCAGACCGCGAAGAACGAGCCGTTGAAAGAAGAAGCACCGGCACTGAAGTTGTTCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TGCCGCTGTAAACAAAACCGCTTCCCTCACCGGAAGCGGTTTTTTTATGCCCATATTTAAGTCGGCGCCGACCCACTGTGGGAGCTGGCTTGCCTGCGAA GGCATCACCTCGGTGTAGATGGCAGACCGAGTCGTCTGCATCGCAGGCAAGCCAGCTCCCACAGTGGATCAGTGGCGTTTGATTGAATTGCATCAAGAGT AAGACCCACAAGCATGTCACCTTGCTTTCCCATCAACCTTTCAGGATAAAATTGGTCACAGATTCTTACAGACCACAGAGGGAGCTTGTCGTAATGATCG TAGGAATCGACCTGGGGACCACCAACAGTCTCGCCGCTGTCTGGCGCGGTGATGCCGCCGAATTGGTGCCCAATGCCCTTGGCCAGTTGCTGACCCCAAG CGTGGTCGGGCTGGATGATCAAGGCCGTGTCCTGGTAGGCCAGGCTGCCAAAGAGCGCCTGCACACTCACCCGCACCTGACCACGTCGCTGTTCAAGCGC
|
|
| Amino Acid Sequence |
>multidrug transporter
MSKSLLSLAVTAFVLSGCSLIPDYQRPEAPVAAQFPQGPAYSSAQAPSQAAVEQGWKQFFHDPALQQLIQTALVNNRDLRVAALNIDAYAAQYSIQRADL FPAVSATGSGSRQRVPARASQTGEANITSQYSATLGISSYELDLFGRVRSLSEEALQKYFATEEARRSTQISLVASVANAYLTWQADKELLKLTQDTLGA FEQSFKLTSRSNEVGVASALDLSQARTSVENARVQLARYTRQVAQDENNLTLLLGTGLPANIASKPLSDDLLSEVPAGLPSDLLKRRPDILQAEYNLKAA NANIGAARAAFFPSISLTANAGTLSPDLGGLFKGGSGTWSFAPQINIPIFNAGSLRASLDYSKIQKEINVANYEKAIQTGFQEVSDGLAARETYKQQLEA QRGFVAANQDYYRLAERRYRIGVDSNLTFLDAQRQLFSAQQSLITDRLAQLNSEVNLYKALGGGWSEQTAKNEPLKEEAPALKLF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|