Pseudomonas trivialis IHBB745, AA957_RS05915
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas trivialis strain IHBB745, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
ACCAAGATGCACAGCTCAGTGTCAGAACTGGCTATAGTCATAGGAAAAGTGGTTCGCGTGTTGCGGCTTCAATAAGGATTTGAATGAACAGGCTTATCTT AATATTCGCAGTGGTAATGCTTGCAGGCTGTACCGCCACCAGCGCCAAGACCCACGCCAAGCGAGGCGTCAGCGGCATCGAGATCGATTGCTCGGGCCTG GGCAACAACTGGAGCAAGTGCGACAAACGCGCCGCCAGAGAGTGCAAGATGCAGGGCTACAAGGTCATCACCAAGTCCAGCGACGCCAAGGACGAAGAGG GTGACTATCCATTCGGCTGGAACCCCGCCGGCGCGGTAACGCGGACGATGTTGGTGATCTGCAATTGAGGGTGTGGCATGTTCGCTACGGGTGTTTATTC AACTAGCAGATAAGTTTATGTATGGGCTGTTCAAATTCATCAAGTCATGCTAAAACCTTCGAAGCGCTTTTCCTAGCTGCTTGAAAAAGAAGGGAAAAAT
|
|
| DNA Sequence for Gene |
>AA957_RS05915
ATGACGAAGTCGGAGTTGATCGAACGAATTGTCACCCATCAAGGGCTGCTCTCATCCAAGGATGTGGAGCTGGCTATCAAGACCATGCTCGAGCAAATGT CCCAGTGCCTGGCAACCGGGGATCGGATTGAGATCCGTGGGTTTGGCAGCTTTTCGCTGCACTATCGCGCACCGCGGGTAGGGCGGAATCCTAAGACTGG GCAGTCGGTGAGCCTGGATGGGAAGTTTGTGCCTCATTTTAAGCCGGGGAAGGAGCTTAGGGACCGTGTGAATGAGGATGAGGAAGAGAGTGTTTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GTCGATTTTGCTTAGGAGGGGAGTATGTATCAAGCCAAGCGAGCTCTGCTGGTGATAATTTTGCTTTTGCTTGCGTTCAGTGTTTTGGTGTTTGTGCTGG AAAACCAGCAAGTTCAAACGCTTTCCTTCCTGGGTTGGGTCACCCCGCAAATTCCAGTGTCTGTCTTTATTACGCTCTCCTTGGTTGTCGGTCTTCTGAT CGGGCCGCTTCTTGGTATTGTATTTCAGCGTAGGGCCCATCGCCGGTCAGTTTCCTCGGATCGCTAGCTGCGTGGTGCGCCGTTGCCGCTAAATGCTGAG TTGCTTGGGTGGGGTGCCTCTCCGCCGGAGTGATGCTGCGATGAGGTGCGCTTCCGAATATCTCAAAGTGCGCCGCTGGCAGTGTGGAACGTCGTGCTCT TGGTTTTAATGCGTTTTTTTCGGTTTTGTGCAATTGCAGAGTGTATGTGCTGGTCTGTTTATGTTGGGTGCGGTCTTGGCTTTTTCTTATTAGTGATGAC
|
|
| Amino Acid Sequence |
>integration host factor subunit beta
MTKSELIERIVTHQGLLSSKDVELAIKTMLEQMSQCLATGDRIEIRGFGSFSLHYRAPRVGRNPKTGQSVSLDGKFVPHFKPGKELRDRVNEDEEESV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|