Strain | Pseudomonas trivialis strain IHBB745, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
ATTCCCCGCCAACGCTTGCACACTATCGGCCTGGGCGGTGTTGCCTGCCATTGGCCACGCGCCTGGCGCGAGGGCACGGCGGTTGATCTGCATATCCCCT CCCTGGGCGCCAGCGCGCGTTATCCGGGCTATGTGGCGTGGTGCCGCAGGGTGGAAAACGGCTACCGCGTCGGTGTCTCGTTTACCGATGAACATGCACT GTTCGGTGCGCGAATGGGTGAGCAAGCATGCCGGATAGAGCGCTATTGCCGCCAGCACGAAGACGCCGAACCCACCGCCCAGCAATTCGAAGCACTGGCC CGCGAGTGGGTATCGCGCCATGCCTGCGAGTTCTCCCATGAGGCATTTGTGGCGCCAGCGCTGGATTAAAGCGGGCTTTGCCCATTGTCGCGGGCCCGTG TTACGCGCTAAGGTTCCTTCCCCCTGCATCCAAATCATGCTGTGCTCCGCCGCACGGGGATGGCTGGCGGCCGGCACCCGTGACCCTGACGAGTAACACG
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DNA Sequence for Gene |
>AA957_RS05595
ATGGCTGATTTACCGATCAATGACCTAAACGTCGAATCCAACGAGACCCTGATCACACCTGATCAGCTCAAGCGCGAAATCCCTTTGAGCGACGCTGCCC TGCAGACCGTCACCAAGGGCCGCGAAGTCATCCGTGACATTCTCGACGGCACCGACCACCGCCTCTTCGTCGTCATCGGGCCCTGCTCGATCCATGACCT CAAGGCTGCCCACGAGTACGCCGAGCGCCTCAAGGTACTGGCGGCGGAAGTGTCCGACACCCTGTACTTGGTGATGCGCGTCTATTTCGAAAAACCGCGT ACCACCGTCGGTTGGAAAGGCTTGATCAACGATCCGTACCTGGACGACTCGTTCAAGATCCAGGATGGCCTGCACATCGGTCGTCAATTGCTGCTGGACC TGGCTGAAATGGGCCTGCCCACCGCCACTGAAGCCCTGGACCCGATCTCCCCGCAGTACCTGCAGGATCTGATCAGCTGGTCGGCGATCGGCGCACGCAC CACTGAATCCCAGACTCACCGTGAAATGGCGTCCGGCCTGTCCTCGGCCGTGGGCTTCAAGAACGGTACCGACGGTGGCCTGACCGTGGCGATCAACGCG CTGCAATCGGTCTCCAGCCCGCACCGTTTCCTGGGTATCAACCAGGAAGGTGGCGTGTCCATCGTCACCACCAAGGGCAACGCCTACGGCCACGTGGTGC TGCGCGGCGGCAACGGCAAGCCCAACTATGATTCGGTCAGCGTTGCGCTGTGCGAGCAGGCGCTGAACAAGGCCAAGATCAAGCCGAACATCATGGTCGA CTGCAGCCACGCCAACTCCAACAAGGACCCGGCCCTGCAACCGCTGGTGATGGAAAACGTCGCCAACCAGATCCTCGAAGGCAACCAGTCGATCATCGGC CTGATGGTCGAGAGCCACCTGAACTGGGGTTGCCAGGCGATTCCAAAAGACCTGGCCGACTTGCAATACGGTGTGTCGATCACCGATGCCTGCATCGATT GGGCCGCCACCGAAAACACCTTGCGCAGCATGCATGCCAAGCTCAAGGACGTATTGCCGAAACGCAAACGCACCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CACAACACTGCGCACACAAAAACGCCGGGCTGAGCCCGGCGTTTTTTATGCTGTTATGTATGCCTTACAACTTCGCGGCATGGCGCTGGTGGCGCTCCAT ATAGCGCTCCACATAGGAGCAGGACGGGATCACCGTATAGCCTGCCTGTTCGGCGAACTTCAAGGCTTCCTCGGTCAATGCCGCCGCAATACCACGGCCC CGCAGTGCGTTGGGCACGAAGGTCCGATAGATATCCAGGGTCTGTTTACCGAGGTCCATATAGGTCAGATAGGCACGATGACCGTCCACATTGGTCTCGA ACTGATGACCAGCCTGGTCATGGTGGATGGACAACGCCTCGCTCATCACTACTCCTCGCGGGTCTTGGTTTCTGACCCCTACCTTACCGATGTTTTTCCG GCGAAGGAACATCTACGCCACCCCGTGCCGGTTCCGACAACGAGAAAACCCTGAGCGCTCACAACCAGCACGTAGGGAATAGTAGGCACCAATCCTGCAA
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Amino Acid Sequence |
>phospho-2-dehydro-3-deoxyheptonate aldolase
MADLPINDLNVESNETLITPDQLKREIPLSDAALQTVTKGREVIRDILDGTDHRLFVVIGPCSIHDLKAAHEYAERLKVLAAEVSDTLYLVMRVYFEKPR TTVGWKGLINDPYLDDSFKIQDGLHIGRQLLLDLAEMGLPTATEALDPISPQYLQDLISWSAIGARTTESQTHREMASGLSSAVGFKNGTDGGLTVAINA LQSVSSPHRFLGINQEGGVSIVTTKGNAYGHVVLRGGNGKPNYDSVSVALCEQALNKAKIKPNIMVDCSHANSNKDPALQPLVMENVANQILEGNQSIIG LMVESHLNWGCQAIPKDLADLQYGVSITDACIDWAATENTLRSMHAKLKDVLPKRKRT
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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