Strain | Pseudomonas trivialis strain IHBB745, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CCTGGGTGTCCAGGCGGGCCAGGGGCGGCGCTTCGCGGCTGGCATCGAGCACCTGCAGGTTGACCTGAAACAGGCGCCCATCGGCGTTGATGGTTTGCTC GCACCGCAGTTTCAAGCGGCCCTGGTCGCACTCGAAGGTTTTCTTGCCGCTGCGCAGGTGCCCCTCCAGGCGCAACTCCGCCAGGCGACTCTGCGCCGCC AGCAACGCGATCGACTTGTCGCGCAACAGGCCGTTGCTCTGGGCCATCAGCCCGGCCACGCGCACGGCGGCGGCCATGGCCACGGCGATGATCGCCAGCG CCACCAGCACCTCGATCAGGGTAAAACCTTGCTCCTTGCGTCGGCCGTACATGGCGCTCTCAAAGCCGGGAAACAGGCCCGCAGACTAGCGCCGGCAGTT GACCGATTGGCGACCGAAACTCCCGAGGATTTTCAATACGACTGACATGTGTTCTTGCAACACTGCGCCACGAATTGCACTCAAGCCAAGGAATGTCGAG
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DNA Sequence for Gene |
>AA957_RS02730
ATGGATATCGCGCGCCTAACGTCCCCATTGCCAGGCCCTCGCGGGCAGCGTGGCTTCACGTTGATCGAGATCATGGTGGTGGTGGTCATCCTCGGGATCC TGGCCGCGATGGTGGTGCCCAAGGTCCTTGATCGGCCGGACCAGGCACGGGCCACTGCAGCGAAGCAGGACATCGGCGGGTTGATGCAGGCGTTGAAACT CTATCGCCTGGACCACGGCACTTATCCGAGCATGAACCAGGGTTTGAAAGTTCTGGTGGAACGCCCGGCGGATGCGAAGAACAACAACTGGCGCGCCTAC CTGGAACGCCTGCCCAACGACCCTTGGGGCCACCCTTATCACTACCTCAACCCGGGCGCCAATGGCGAGGTGGACGTGTTCTCCCTCGGCGCCGACGGCC AGCCGGATGGCGACGGCGTGAATGCCGATATCGGCTCCTGGCAGTTGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGCCCGCCATGAAACGGTATTCGCCCGCAGCGGCGAAGCAGCGCGGCATGGCGATTATCAGCGCGTTGCTGATCGCCGCGGTGGTGGCGGTACTGGCCGG CGCCATGCTCACGCGCCAGACCGTGTTCACCCGCAGCCTGGAAGCCGAACAGTTGCGCATCCAGGGCCAGTGGCTGTTGCAGGGTGGCCTTGAGCGCAGC CGGCAGATGCTCTGGGACGCGCGCCAAAAAGACGTGCTCACCCGCCTCGATCAACCCTGGGCCCGTGCCCAAGACGGCGTTTTTGAGGGGCGGATCGTGG ACGAGCAGGGCAAGTTCAACCTGCGCAACCTGGTCAATCGCCAGCAGGTGGACACCGAGCAGTTGCAGAGCTTCGAGCGGCTGTGTCGCCTGATCGGCGT TGACCCGGCGGTGAGCCGGCGCATCAGCCAGCGGGTGATCGCCTCTTATGAACCCCCCGCCAAATACCCGATGCTGCGCAGCCTCGATGACTTGAGCGGG
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Amino Acid Sequence |
>general secretion pathway protein GspG
MDIARLTSPLPGPRGQRGFTLIEIMVVVVILGILAAMVVPKVLDRPDQARATAAKQDIGGLMQALKLYRLDHGTYPSMNQGLKVLVERPADAKNNNWRAY LERLPNDPWGHPYHYLNPGANGEVDVFSLGADGQPDGDGVNADIGSWQL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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