Pseudomonas trivialis IHBB745, AA957_RS01020
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas trivialis strain IHBB745, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCTGTGGGCATCGATGGGGTTGAGCACGCCACTGTCTTCGAGCGCTATTTGCTCCCAGGCACCTTGAAGAGCTTGAACATCGGGGTCTGATATCGATGAC ATACAAATTCCTTTTTGCAGAAGGGGTTCCCGCCGTTCATTAGGGGAAATGCGGCATTTCTTATTGCTTTTTGCGTAATTGCGCGTAGGAATATTCTTAT TTTTTAGTTTTTACAGAGATTTTTCCTTAAAAGACAGGCAATTCGCGTTAAGTTGCCTGGCCGCCGGGTAACGTCTTGTAACGGACCGTCTATGCTCTGG GTGCCTGTCAGTCATGACACCCGTGTCACTGAAATGAAGCCTCTTGTTGCTTAGGTGTAATGCTTCAAGTGGATGGGGCGGTCCCTTTGCCGGCAAAGGG CCGCGTAATGCGTGCCCGGACGTTGCCCCTGTTTATTCAGTCGTTATTCAGGTCTGTGTTTTTCGGGCGCTGGATTTCAACTCACCAGGGTGTATCAATT
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| DNA Sequence for Gene |
>AA957_RS01020
TTGAACAACACTCCCCAGCTGCATCGCTATTTACCGTCGGATGAAATCGATCTCTTTGAACTGTTCGGTGCGATCTGGAAGCAAAAAAAACTGGTCATTG GTTGCACGATCCTGGCGGGCCTTCTGGGAGTAGGCTACGCGTATCTTGCGACGCCGGTTTACCAGGTCAGCAGTGTGCTGCGGCCTGCCGCAATCAATGA ACTGGATGCCCTCAACCGTTCCGAAGTGTACAAGCTACCGCCGGCCGAGGCGCTGAGCAAAGTAGGCGCGCAGTTAGACTCATACGAAGCTCGCCTGGGC TTTTTCCGGGCCAATCCCGCGCTGTTCGAGGCGTTTGAGCAGCCTGGGCGCAGCCTGGAGCAGAGCTTTGAGGCGTTTAACAATAATGCCATTCGCCTGG TGCTGCCGGACCCCAAGAAGCCTGACGTACTCAACGCTTCCATCCGCCTGGAAATGCAGTACCCCAATGGGATCGACGGGGTCGCCATTCTCAACGGGTT TGTGGCTTACGCCATCGCGCAGCAGCGTGATCAGGTCGGGGCGGACCTCAAGGTGATCGTCAACAACCGCCTCAACGAGCTCAAAGGCAAGATCGATGCG GCACGTGCCAACTATGAAACGGGCAAAACGTCGCAAATCGCCAGATTGCTGGAGGCGGATAAAGTCAAACGCGCTCAATTGCAAGACGAGCTCACCGCGT TACGCATGCAGATGAGAGCGCAACGCACCAGTCGCATGGCCGAGCTGGCTGAGGCTATCTCGATCGCCCAGTCAATCGGCATCAAGCATCCCACCACACC TTCTGCCATGGGTGCTGATGCACTTCGTGGCGCCAATCAGGTGATGCGCACGGAAGTGACCAACCAGAAAATCCCGCTGTACTTCATGGGCACTGAGGCG TTGGAAGCCGAGCGGGCCGCGTTGGCCCGACGAACCAATGATGATTTTACCAACAGTCGCATTGCGGAGATTGGCAAGGAATTGCGCATGCTTGACGTCA ATCGCCAAGTGGAGGTACTCGAAAGTCGTAAAAACGAAGACATATTCCTGCAAGACGTTGAACCGCTCTGGGCAGAGGAGGCCCGGCTGCGTGGCCTGAA TATCGACATGAGTGCACTGAAACTGGTGACTGTCGACCGGCAGGCGCAGGAGCCCTTGAGCCCAATCAAACCCAGGAAGGCCTTGATCATTGCATTGGGC TTGGTGGCAGGGCTGATGTTGGGCGTATTGGTGGCGTTGATCCGGCATTTCGTCCAGGTTCGACGAGAATCCGGCCCCTTTTCGGTGTTCGATGAGCATC GGTTGCCACGCCAATAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GACGGGCTGAAACCCTCGCGGGCTTGCACACAACAAGCCCGCCCATCACATTCACAAGACAGCTTTTCACAATTCTTGTTTAACTTTTGGTTACAGCTTG TGGCTAAATAACGGCAAAGGGCCACGAGCCGGATTGTCACTTAGCCGGTCGTGCCGATTGTGTGAATTGTGATTTCAGGTGTTGCTATCCAACCTCGGCC GTAGTGGGCACGCAGGAGCTGCCTGTTTTCTTCTGACGCGTGACGAATCCCCGTGAAACTCATCATTGTTATGCTCTACGTTGCCTCGATTGCCTATGTG CACCTGCGCGGTCGGGTGCGGCATAAGCTAGGCCGCCAACTCAGTGATCATTCGACCTTCCTGGCACCGATCAACTGCTTTCTCTACCTTTTCTCCAAAC TGCCCAGCCGACCCTATCTGTCGCCCAGCGATTTCCCGGACCTGAGCCCGCTCCAGGCGCATTGGCAAGAAATCCGCCAGGAAGGCCTGGCCCTGATGCG
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| Amino Acid Sequence |
>chain-length determining protein
MNNTPQLHRYLPSDEIDLFELFGAIWKQKKLVIGCTILAGLLGVGYAYLATPVYQVSSVLRPAAINELDALNRSEVYKLPPAEALSKVGAQLDSYEARLG FFRANPALFEAFEQPGRSLEQSFEAFNNNAIRLVLPDPKKPDVLNASIRLEMQYPNGIDGVAILNGFVAYAIAQQRDQVGADLKVIVNNRLNELKGKIDA ARANYETGKTSQIARLLEADKVKRAQLQDELTALRMQMRAQRTSRMAELAEAISIAQSIGIKHPTTPSAMGADALRGANQVMRTEVTNQKIPLYFMGTEA LEAERAALARRTNDDFTNSRIAEIGKELRMLDVNRQVEVLESRKNEDIFLQDVEPLWAEEARLRGLNIDMSALKLVTVDRQAQEPLSPIKPRKALIIALG LVAGLMLGVLVALIRHFVQVRRESGPFSVFDEHRLPRQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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