Pseudomonas parafulva YAB-1, XB13_RS03530
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas parafulva strain YAB-1 contig3, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ACATCGACCGCTTCAAGAAAATCAACGACCGCCACGGCCACCCCATGGGCGACCGAGTAATCAAGAGCCTGGCGCTGTTTCTCAAGCAACGCCTGCGCAA GACCGATTTCATCGGACGCTACGGCGGCGAGGAATTCGCGATCGTCATGCCCAATACCCCATTGGAGGCGGCGTACAAGGTGCTCGATGACATCCGCGGG CGTTTTGCCGAAATCCTCTACCCAGCCCAGCCCCATGACCTGCGCTGTACGTTCAGCGCGGGCGTGGTGCAACTCGATGACGGCCTCGATGCGCTGACCA TGGCCAGCGCGGCCGACGAGGCGCTGTACCGGGCCAAGCATGCGGGACGCAATTGCGTGGTGCGTGTGGAGCCCTGAAAAGCTGGGCAAAGGATAAAGGC ACTTTGCCATTCAACTGCGTGCCGCCGTCATCATCGCGTCACACGAACGCAATAACTTCAGGCCCCTGACTCCTCCCTCCCCCGCAGGAAGCTCGCGGCT
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| DNA Sequence for Gene |
>XB13_RS03530
ATGCGCCTGAAGTGGCTGACCAATTTGAATACGTTGTTACTGGTGACGGTGTGCATCGCCCTGGGCGTCACGCTGTGGTGGTCGCAGCGGGCGCTGGAGC GCCCCTACCAGATGATGGAGCGCTACCTGACCCTGTCGCGCCATTTCCAGACTGAGGCGGCCGAGAACATCCAGGCCTATCTTGGCAACGGCGATGCCGT GCGCCATGCCGCGGCACTGCAGGCCACGGTGCAACTGCAAGCCTCGGTGGCCGACTGGCCCGAGACGATGGCCAGCCAACTGCGCCCCAGCCTGGACGAC CTCCAGGCCTTCAGCGCGGGTGAGTTGCTGGCCGCCGGCAAGTTGGCCGGTGACCCCCAGGCGCTGTTGCTGCAAGCCGAGCGCGAGCTGGGGGCCAATC TGGAGCAACTGACCACCTATGCGCGCGACAGCACCAGCCCCGACGCTGGGCGATACCTGCTGCCGCTTGTCGAGGCGACCTTGCACCTGAGCAGGCTTGG CCTGGCGCGGGAAAAGCTGGTGGGCAGCGGCCGGCCGGAACTTGCGAACGAGCTGGAACGCGAGTTGCAATCGATTCAGGCCCAGGCGCACGTCATCGAA GGCTTGCCGCTGCTGGGCTTGACCCGTGCTGCCGAATCCGGCGCGGATGACTTTGCTGCGCTGATGGGTTTGCAGACCGATACCCGTGCCCAGCAAGAAG ACGTCGCCGTAGGCCTCAAGCGCGAGTTGCAAAGCCTGGTTGGGCGCTATCCGGCCGAGCTGCAACGTACCCGTGCCCAGATCGCCCAGCGCGCCGCCCT GGCGACCCGCGCCACGCAACAACTGGAGGCAGTGCGCCAGGCCATCGCGGCCCTGGAGCCAGAGGTGCGCAGCCTGCATGGCACGATCGCGGGCGAAGTG CGCACCCTGCAAGGGGGGATGATCGTGATGATCCTGCTGATCGCCCTGCTCATCGACACCCTGCAACGTCGTCTTGCACGCACACTCACCGGCCTGGCGC CTGCGCTGTCGCGCTGGGCCGAGGGCGATTTTACCCAGCCTGTCGAAATGGGCAGGACCAACCGCGAGCTGCATGACATCCAGGCTTCGCTCAATCGCCT GCGCCAGTACCTGGTCGAACTGGTAGGCGCCCTGCGGCACAACGCCGAGCAAGTGGCCGGCAGCAGCCATGCGCTGGCCGACATGAGTGCTGCCTTGCAC GATGGCGCACAACGACAGGCCGGGGATACCGGGCAGATTCGCGACGCGCTTGGAGAACTGGAAGCGACCATCCAGCAGGTGGCTGGCGACGCCAGCGCTG CAGCCCTGGCCAGCCGTGACGCAGGCCGGGCAGTGGAACAGGGCCAGGCGGTGATCGGGCAAAGCTTGTCGGGTTTACGCACGCTGGTCGACGAGGTGCA GGGCAACGCGCGCATGATTGAGCAACTGGCAGAAGAGTCGGCCACGATCGGTGGCGTGCTGACAGTGATCCGGTCCATCGCGGAACAGACCAACCTGCTG GCACTCAATGCCGCCATCGAAGCCGCTCGCGCCGGTGAAATGGGTCGCGGGTTCGCCGTGGTAGCCGACGAAGTCCGCACCCTGGCCCAACGCACCACCG GCGCTACTGGGGAAATCCAGACCCTGATCGACAGATTGCAGCAGGCAGCCAAGGGCGCCGTGGACGGTACGCGGGTACAACTGGAGCATGCCGAGGCCAC TGCCAATCAGGCCCAGACCGCCGACGGCGCATTGGACGAAATCGTGTGCGCGATCCGCACCATTGCCGACACTGCCCTGCGCATTGCCGAAGTGACGGCG CAACAAAGCGCAGCGGTGAGCGAGATCCGTGACCACAGCGAGCGGATTCATCAACTGGGCGGGGATAACCTGCAACGCATCGGTGAAGGGCGCGAGCAAG GCGATCACCTGCTTAGCCTTGGCAGCGCCCTGAACCAGGCGGTGGGTGCCTTCAGGGTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGATCGGCAGAGCAGCCCACCCAAGCTCAAGACATAGCTATAGACCAGCACCGGCCAGGCGGGCAGGCCCACGCATGGTTCCCTGAGCGTCAACTCCGT TATGATGCGCGGCACGTTCGATCTTGCGAGTTCACCATGCACCGCCTGTTTTTCCTGTTGTGCCTACTGCTGGCCAGCCCGGTGTTCGCCACGGGGTTGC TGGACAATCGCCCCAGCGCCACCCTCGGCGCCTCCTCACTGGCCGGCAATGCCGACTTCCTCCCGGTACACGAAGCCTTCAAGCTCAGCCTGATCCAGGC CGACGCCCATGCGATCAAGCTGCGCCTGGTGGCCACCGACGGCTATTACCTGTACCGCCACCGTTTCGTGTTTCGAACCGAGCCGGCCGACATTGTTCTG GGCACGCCGGTCATCCCGAAGGGCGAGGCCAAGCATGACGAATTCTTCGGCGATGTGGAGGTGTATCACGGCATCGTCGACATCGAGCTGCCACGCAATG
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| Amino Acid Sequence |
>chemotaxis protein
MRLKWLTNLNTLLLVTVCIALGVTLWWSQRALERPYQMMERYLTLSRHFQTEAAENIQAYLGNGDAVRHAAALQATVQLQASVADWPETMASQLRPSLDD LQAFSAGELLAAGKLAGDPQALLLQAERELGANLEQLTTYARDSTSPDAGRYLLPLVEATLHLSRLGLAREKLVGSGRPELANELERELQSIQAQAHVIE GLPLLGLTRAAESGADDFAALMGLQTDTRAQQEDVAVGLKRELQSLVGRYPAELQRTRAQIAQRAALATRATQQLEAVRQAIAALEPEVRSLHGTIAGEV RTLQGGMIVMILLIALLIDTLQRRLARTLTGLAPALSRWAEGDFTQPVEMGRTNRELHDIQASLNRLRQYLVELVGALRHNAEQVAGSSHALADMSAALH DGAQRQAGDTGQIRDALGELEATIQQVAGDASAAALASRDAGRAVEQGQAVIGQSLSGLRTLVDEVQGNARMIEQLAEESATIGGVLTVIRSIAEQTNLL ALNAAIEAARAGEMGRGFAVVADEVRTLAQRTTGATGEIQTLIDRLQQAAKGAVDGTRVQLEHAEATANQAQTADGALDEIVCAIRTIADTALRIAEVTA QQSAAVSEIRDHSERIHQLGGDNLQRIGEGREQGDHLLSLGSALNQAVGAFRV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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